Variant report

Variant	rs2127016
Chromosome Location	chr15:74117603-74117604
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs10519014	1.00[ASN][1000 genomes]
rs11072444	1.00[ASN][1000 genomes]
rs11632590	0.81[EUR][1000 genomes]
rs11632687	1.00[ASN][1000 genomes]
rs11633467	0.90[AFR][1000 genomes]
rs11634236	1.00[ASN][1000 genomes]
rs11635478	0.87[EUR][1000 genomes]
rs11635549	1.00[ASN][1000 genomes]
rs11639352	1.00[ASN][1000 genomes]
rs11855112	1.00[ASN][1000 genomes]
rs11857351	1.00[ASN][1000 genomes]
rs12591658	0.87[EUR][1000 genomes]
rs12904100	1.00[ASN][1000 genomes]
rs12913670	1.00[ASN][1000 genomes]
rs12914022	1.00[ASN][1000 genomes]
rs12915342	1.00[ASN][1000 genomes]
rs12915712	1.00[ASN][1000 genomes]
rs12916637	1.00[ASN][1000 genomes]
rs1377063	0.90[AFR][1000 genomes]
rs1452388	0.86[EUR][1000 genomes]
rs1452390	0.87[EUR][1000 genomes]
rs1452391	0.89[EUR][1000 genomes]
rs1584738	0.91[AFR][1000 genomes]
rs16958352	1.00[ASN][1000 genomes]
rs16958362	0.84[ASN][1000 genomes]
rs16958372	1.00[ASN][1000 genomes]
rs16958378	0.87[ASN][1000 genomes]
rs1901569	0.88[AFR][1000 genomes]
rs1901570	0.90[AFR][1000 genomes]
rs2127017	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2167648	0.88[AFR][1000 genomes]
rs2415232	0.86[EUR][1000 genomes]
rs2415233	0.84[EUR][1000 genomes]
rs28493876	0.85[EUR][1000 genomes]
rs34021526	1.00[ASN][1000 genomes]
rs34617511	1.00[ASN][1000 genomes]
rs35534436	1.00[ASN][1000 genomes]
rs35809461	0.88[EUR][1000 genomes]
rs35905425	1.00[ASN][1000 genomes]
rs41449350	0.87[ASN][1000 genomes]
rs4145873	0.90[AFR][1000 genomes]
rs4145874	0.90[AFR][1000 genomes]
rs4886421	0.90[AFR][1000 genomes]
rs4886660	0.89[AFR][1000 genomes]
rs4886663	0.90[AFR][1000 genomes]
rs4886664	0.90[AFR][1000 genomes]
rs58838945	0.84[ASN][1000 genomes]
rs62004658	1.00[ASN][1000 genomes]
rs896591	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043335	chr15:74078689-74241186	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:74111000-74119200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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