Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:54867084..54868948-chr15:54872476..54874542,2	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs16974746	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16974749	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16974760	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28373275	0.83[AMR][1000 genomes]
rs28409858	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28432763	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28583403	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56313318	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57263358	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57885004	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58494114	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58836650	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59003953	1.00[EUR][1000 genomes]
rs7172780	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7179699	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73403823	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73421552	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73421555	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73421560	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74014209	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8033128	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817539	chr15:54132584-55095235	Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv1038660	chr15:54756184-55039913	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
3	nsv904236	chr15:54820897-54912439	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1039548	chr15:54856965-54914519	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:54811000-54869600	Weak transcription	Aorta	Aorta
2	chr15:54867600-54871200	Enhancers	Fetal Lung	lung
3	chr15:54868600-54869600	Weak transcription	Placenta Amnion	Placenta Amnion

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