Variant report

Variant rs58900002
Chromosome Location chr1:10136861-10136862
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10095000-10147600 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr1:10106800-10155400 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:10107000-10140600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr1:10107400-10165400 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr1:10109400-10158400 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr1:10116600-10145000 Weak transcription Stomach Mucosa stomach
7 chr1:10118200-10163000 Weak transcription Aorta Aorta
8 chr1:10119200-10155200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:10120000-10156400 Weak transcription Spleen Spleen
10 chr1:10120000-10162600 Weak transcription Gastric stomach
11 chr1:10120400-10163000 Weak transcription Fetal Kidney kidney
12 chr1:10121800-10141400 Weak transcription Hela-S3 cervix
13 chr1:10124400-10155200 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr1:10124600-10140600 Weak transcription Fetal Brain Female brain
15 chr1:10125800-10165400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:10125800-10165400 Weak transcription Fetal Brain Male brain
17 chr1:10126000-10154800 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr1:10126000-10161000 Weak transcription A549 lung
19 chr1:10126400-10162800 Weak transcription Brain Germinal Matrix brain
20 chr1:10126400-10163000 Weak transcription Pancreas Pancrea
21 chr1:10126400-10165400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr1:10127800-10140600 Weak transcription Fetal Lung lung
23 chr1:10128000-10144800 Weak transcription Psoas Muscle Psoas
24 chr1:10129000-10139200 Weak transcription Placenta Placenta
25 chr1:10129000-10145200 Weak transcription Right Atrium heart
26 chr1:10131400-10137800 Strong transcription Fetal Muscle Leg muscle
27 chr1:10132200-10145000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr1:10132200-10156000 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr1:10132400-10140600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:10132400-10155200 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr1:10132400-10155400 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr1:10132400-10163000 Weak transcription H1 Cell Line embryonic stem cell
33 chr1:10132600-10162600 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:10132600-10165400 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr1:10133200-10137400 Enhancers Brain Substantia Nigra brain
36 chr1:10133200-10137800 Strong transcription Fetal Muscle Trunk muscle
37 chr1:10133200-10138400 Strong transcription Fetal Stomach stomach
38 chr1:10133600-10139000 Strong transcription Primary B cells from cord blood blood
39 chr1:10133800-10138000 Enhancers Brain Hippocampus Middle brain
40 chr1:10134600-10140600 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr1:10134600-10166200 Weak transcription Colonic Mucosa Colon
42 chr1:10134600-10166600 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr1:10134800-10139600 Weak transcription Fetal Thymus thymus
44 chr1:10134800-10141600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
45 chr1:10134800-10163000 Weak transcription H9 Cell Line embryonic stem cell
46 chr1:10135000-10137400 Strong transcription Skeletal Muscle Female skeletal muscle
47 chr1:10135000-10139600 Weak transcription Small Intestine intestine
48 chr1:10135000-10143400 Weak transcription Duodenum Mucosa Duodenum
49 chr1:10135000-10154800 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr1:10135000-10160400 Weak transcription Ovary ovary

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