The 2.0 version of rSNPBase

Variant report

Variant rs60413811
Chromosome Location chr1:10184284-10184285
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10145400-10189600 Weak transcription Psoas Muscle Psoas
2 chr1:10145800-10197000 Weak transcription Stomach Mucosa stomach
3 chr1:10163400-10219000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:10164000-10227400 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr1:10167400-10188400 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr1:10167400-10192600 Weak transcription Small Intestine intestine
7 chr1:10167600-10190400 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr1:10167600-10207400 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr1:10169400-10195000 Weak transcription Aorta Aorta
10 chr1:10170200-10187000 Weak transcription HUVEC blood vessel
11 chr1:10172000-10188200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr1:10173000-10185200 Strong transcription Fetal Intestine Large intestine
13 chr1:10173000-10199400 Strong transcription Primary T cells fromperipheralblood blood
14 chr1:10173200-10185600 Strong transcription Liver Liver
15 chr1:10175000-10207200 Strong transcription Primary T helper cells fromperipheralblood blood
16 chr1:10175600-10184400 Strong transcription Primary neutrophils fromperipheralblood blood
17 chr1:10177000-10184600 Strong transcription Primary T helper cells PMA-I stimulated --
18 chr1:10178200-10187000 Weak transcription NHDF-Ad bronchial
19 chr1:10178200-10187800 Weak transcription HSMMtube muscle
20 chr1:10179200-10186400 Strong transcription Fetal Intestine Small intestine
21 chr1:10179400-10185800 Strong transcription Primary T cells from cord blood blood
22 chr1:10179800-10186600 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr1:10179800-10188400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr1:10179800-10189400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:10179800-10190600 Weak transcription Gastric stomach
26 chr1:10179800-10190800 Weak transcription NHLF lung
27 chr1:10180000-10188200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:10180000-10188200 Weak transcription Colonic Mucosa Colon
29 chr1:10180000-10211200 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr1:10180200-10186800 Weak transcription HSMM muscle
31 chr1:10180200-10187200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr1:10181000-10185800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:10181000-10199600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr1:10181200-10184400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:10181200-10185000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr1:10182000-10188200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:10182200-10185400 Weak transcription Brain Substantia Nigra brain
38 chr1:10182200-10186200 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr1:10182200-10187000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:10182200-10187800 Weak transcription NHEK skin
41 chr1:10182200-10189800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:10182200-10231200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr1:10182400-10185400 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr1:10182400-10185600 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr1:10182400-10187000 Weak transcription H9 Cell Line embryonic stem cell
46 chr1:10182400-10187000 Weak transcription Lung lung
47 chr1:10182400-10187000 Weak transcription Ovary ovary
48 chr1:10182400-10187000 Weak transcription GM12878-XiMat blood
49 chr1:10182400-10187800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr1:10182400-10188000 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015