The 2.0 version of rSNPBase

Variant report

Variant rs59190975
Chromosome Location chr7:38813276-38813277
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:38757200-38835400 Weak transcription Psoas Muscle Psoas
2 chr7:38761000-38820400 Weak transcription Stomach Mucosa stomach
3 chr7:38763200-38828000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr7:38763400-38828800 Weak transcription HepG2 liver
5 chr7:38774800-38816800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr7:38775800-38816600 Strong transcription Primary monocytes fromperipheralblood blood
7 chr7:38780800-38828800 Weak transcription Gastric stomach
8 chr7:38784800-38835000 Weak transcription NHEK skin
9 chr7:38785000-38815800 Weak transcription NHLF lung
10 chr7:38785600-38834600 Weak transcription HMEC breast
11 chr7:38785600-38835000 Weak transcription NH-A brain
12 chr7:38787000-38827400 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr7:38789000-38818800 Strong transcription Primary B cells from peripheral blood blood
14 chr7:38789600-38816800 Strong transcription Primary T cells fromperipheralblood blood
15 chr7:38791800-38813400 Weak transcription Osteobl bone
16 chr7:38791800-38814200 Weak transcription K562 blood
17 chr7:38792200-38828000 Weak transcription Colon Smooth Muscle Colon
18 chr7:38792400-38821800 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr7:38793200-38818200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr7:38793400-38828600 Weak transcription Small Intestine intestine
21 chr7:38793400-38861200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr7:38793600-38832600 Weak transcription Brain Angular Gyrus brain
23 chr7:38798200-38828800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr7:38800200-38837600 Weak transcription H9 Cell Line embryonic stem cell
25 chr7:38801000-38818400 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr7:38801600-38816400 Strong transcription Liver Liver
27 chr7:38801600-38817600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr7:38801800-38816200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr7:38802000-38816600 Strong transcription Primary T helper cells fromperipheralblood blood
30 chr7:38802000-38816600 Strong transcription Adipose Nuclei Adipose
31 chr7:38803200-38845400 Weak transcription Colonic Mucosa Colon
32 chr7:38803200-38846000 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr7:38804400-38836200 Weak transcription Fetal Brain Male brain
34 chr7:38804600-38814600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr7:38805600-38816600 Strong transcription Primary T regulatory cells fromperipheralblood blood
36 chr7:38805800-38813400 Strong transcription Dnd41 blood
37 chr7:38805800-38815000 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr7:38806200-38827200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr7:38806200-38828800 Weak transcription Pancreas Pancrea
40 chr7:38806400-38827600 Weak transcription Brain Inferior Temporal Lobe brain
41 chr7:38806600-38828800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr7:38806800-38815600 Weak transcription Fetal Brain Female brain
43 chr7:38806800-38816200 Weak transcription Aorta Aorta
44 chr7:38806800-38821600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr7:38806800-38828400 Weak transcription Fetal Lung lung
46 chr7:38806800-38828800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr7:38806800-38828800 Weak transcription Brain Substantia Nigra brain
48 chr7:38806800-38828800 Weak transcription Esophagus oesophagus
49 chr7:38806800-38828800 Weak transcription Thymus Thymus
50 chr7:38806800-38828800 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015