Variant report

Variant	rs59194254
Chromosome Location	chr18:45104404-45104405
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11082608	0.84[EUR][1000 genomes]
rs11082609	0.85[EUR][1000 genomes]
rs1108794	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1510014	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16954251	0.80[EUR][1000 genomes]
rs16954613	0.89[EUR][1000 genomes]
rs16954994	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6507765	0.82[EUR][1000 genomes]
rs7230633	0.85[EUR][1000 genomes]
rs7236741	0.83[EUR][1000 genomes]
rs8090686	0.88[EUR][1000 genomes]
rs8092757	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8094987	0.82[EUR][1000 genomes]
rs8096375	0.83[EUR][1000 genomes]
rs880876	0.80[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:45102200-45107000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr18:45103000-45104600	Enhancers	H1 Cell Line	embryonic stem cell
3	chr18:45103400-45104600	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr18:45103400-45104600	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr18:45103400-45104600	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr18:45103400-45104800	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr18:45103600-45104600	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr18:45103600-45104600	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr18:45103800-45104800	Enhancers	H9 Cell Line	embryonic stem cell
10	chr18:45103800-45104800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr18:45104000-45104600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr18:45104200-45108600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr18:45104400-45104600	Enhancers	iPS-20b Cell Line	embryonic stem cell
14	chr18:45104400-45108400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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