Variant report

Variant	rs880876
Chromosome Location	chr18:45082102-45082103
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11082608	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11082609	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1108794	0.83[EUR][1000 genomes]
rs11664032	0.83[ASN][1000 genomes]
rs1510014	0.86[EUR][1000 genomes]
rs16954251	0.83[ASN][1000 genomes]
rs16954613	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16954994	0.83[EUR][1000 genomes]
rs59194254	0.80[EUR][1000 genomes]
rs6507765	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7230633	0.86[EUR][1000 genomes]
rs7236741	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7505509	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs8090686	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8092757	0.81[EUR][1000 genomes]
rs8094987	0.93[EUR][1000 genomes]
rs8095159	0.90[EUR][1000 genomes]
rs8096375	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:45081800-45084400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr18:45082000-45082400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr18:45082000-45082600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr18:45082000-45082600	Enhancers	Spleen	Spleen

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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