The 2.0 version of rSNPBase

Variant report

Variant rs59344869
Chromosome Location chr6:87877896-87877897
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:87866600-87878200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
2 chr6:87866600-87879000 Weak transcription Esophagus oesophagus
3 chr6:87866600-87880000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr6:87866600-87883600 Weak transcription Right Ventricle heart
5 chr6:87866600-87883600 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr6:87866600-87885400 Enhancers Primary T helper naive cells fromperipheralblood blood
7 chr6:87866600-87886000 Weak transcription Fetal Muscle Trunk muscle
8 chr6:87866600-87886600 Weak transcription Aorta Aorta
9 chr6:87866600-87889800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr6:87866600-87890000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr6:87866600-87890200 Weak transcription Fetal Muscle Leg muscle
12 chr6:87867000-87883400 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr6:87867000-87886000 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr6:87867000-87895600 Weak transcription HSMM muscle
15 chr6:87867000-87915600 Weak transcription NH-A brain
16 chr6:87867200-87883200 Weak transcription HMEC breast
17 chr6:87867200-87893400 Weak transcription Adipose Nuclei Adipose
18 chr6:87867400-87880800 Weak transcription Liver Liver
19 chr6:87867400-87881400 Weak transcription Duodenum Mucosa Duodenum
20 chr6:87867800-87879400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr6:87867800-87881000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr6:87867800-87883000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr6:87867800-87883400 Weak transcription Primary hematopoietic stem cells blood
24 chr6:87867800-87885800 Weak transcription Fetal Thymus thymus
25 chr6:87867800-87886400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr6:87868000-87933000 Weak transcription Hela-S3 cervix
27 chr6:87868200-87886000 Weak transcription Thymus Thymus
28 chr6:87868200-87889600 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr6:87868400-87878800 Weak transcription Lung lung
30 chr6:87868400-87879400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr6:87868400-87879400 Weak transcription Fetal Stomach stomach
32 chr6:87868400-87880000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr6:87868400-87883600 Weak transcription Small Intestine intestine
34 chr6:87868600-87889800 Weak transcription Fetal Intestine Large intestine
35 chr6:87868800-87878000 Enhancers Primary T regulatory cells fromperipheralblood blood
36 chr6:87868800-87881400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr6:87869000-87882800 Weak transcription Primary B cells from cord blood blood
38 chr6:87869000-87885200 Weak transcription Placenta Placenta
39 chr6:87869400-87885800 Enhancers Primary T helper cells fromperipheralblood blood
40 chr6:87869600-87878800 Weak transcription Fetal Intestine Small intestine
41 chr6:87869600-87884800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr6:87869800-87878800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr6:87870000-87879200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr6:87870000-87882800 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr6:87871400-87880200 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr6:87871400-87883600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
47 chr6:87871400-87890000 Weak transcription Pancreas Pancrea
48 chr6:87871400-87890200 Weak transcription Gastric stomach
49 chr6:87871600-87880200 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr6:87872600-87880400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015