Variant report

Variant	rs59433499
Chromosome Location	chr12:8827789-8827790
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10082771	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10128818	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12296571	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12296895	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12299640	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12300013	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12303273	0.83[EUR][1000 genomes]
rs12306245	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12314360	0.86[EUR][1000 genomes]
rs12385824	0.92[ASN][1000 genomes]
rs28372697	0.92[ASN][1000 genomes]
rs56878267	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57541397	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs58333563	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs58503001	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs58544193	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs58612925	0.83[EUR][1000 genomes]
rs58732156	0.83[EUR][1000 genomes]
rs60932450	0.83[EUR][1000 genomes]
rs7132012	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2512154	chr12:8825370-8828159	Enhancers Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:8811800-8829600	Weak transcription	Thymus	Thymus
2	chr12:8821600-8845000	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr12:8823800-8828000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr12:8824000-8833600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr12:8825000-8827800	Weak transcription	Adipose Nuclei	Adipose
6	chr12:8827600-8827800	Enhancers	Pancreas	Pancrea
7	chr12:8827600-8828800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr12:8827600-8829000	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr12:8827600-8829400	Enhancers	HUVEC	blood vessel

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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