The 2.0 version of rSNPBase

Variant report

Variant rs12296895
Chromosome Location chr12:8839669-8839670
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:8821600-8845000 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr12:8828400-8840400 Weak transcription Brain Anterior Caudate brain
3 chr12:8830000-8840400 Weak transcription Primary T cells from cord blood blood
4 chr12:8834600-8840000 Weak transcription Fetal Lung lung
5 chr12:8834600-8840200 Weak transcription HSMMtube muscle
6 chr12:8834600-8840400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr12:8834600-8840600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr12:8834800-8839800 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr12:8834800-8840000 Weak transcription NH-A brain
10 chr12:8834800-8840400 Weak transcription HSMM muscle
11 chr12:8834800-8844800 Weak transcription Placenta Amnion Placenta Amnion
12 chr12:8834800-8848600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr12:8835000-8839800 Weak transcription Colon Smooth Muscle Colon
14 chr12:8835000-8840000 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr12:8835000-8840000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr12:8835000-8840000 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr12:8835000-8840000 Weak transcription Fetal Kidney kidney
18 chr12:8835000-8840000 Weak transcription Osteobl bone
19 chr12:8835000-8840400 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr12:8835800-8840400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr12:8836000-8840200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr12:8837600-8840200 Weak transcription Placenta Placenta
23 chr12:8837800-8839800 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr12:8839000-8840000 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr12:8839000-8840600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr12:8839200-8843200 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr12:8839400-8840200 Enhancers Monocytes-CD14+_RO01746 blood
28 chr12:8839400-8840200 Enhancers NHEK skin
29 chr12:8839400-8841000 Enhancers Primary monocytes fromperipheralblood blood
30 chr12:8839600-8839800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr12:8839600-8840600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr12:8839600-8840600 Enhancers HUVEC blood vessel
33 chr12:8839600-8841000 Transcr. at gene 5' and 3' Hela-S3 cervix
34 chr12:8839600-8841200 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr12:8839600-8841200 Enhancers Primary neutrophils fromperipheralblood blood
36 chr12:8839600-8841200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr12:8839600-8841200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr12:8839600-8842000 Enhancers Rectal Smooth Muscle rectum
39 chr12:8839600-8843200 Enhancers Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015