The 2.0 version of rSNPBase

Variant report

Variant rs12304092
Chromosome Location chr12:8854558-8854559
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:8851400-8862000 Weak transcription Gastric stomach
2 chr12:8851600-8855600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr12:8851600-8862000 Weak transcription Lung lung
4 chr12:8851800-8854600 Weak transcription Brain Substantia Nigra brain
5 chr12:8851800-8855600 Weak transcription Brain Angular Gyrus brain
6 chr12:8851800-8859800 Weak transcription Spleen Spleen
7 chr12:8851800-8862000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr12:8851800-8862000 Weak transcription Left Ventricle heart
9 chr12:8851800-8862000 Weak transcription HSMM muscle
10 chr12:8851800-8862000 Weak transcription HSMMtube muscle
11 chr12:8851800-8863400 Weak transcription Right Ventricle heart
12 chr12:8851800-8873200 Weak transcription Fetal Muscle Trunk muscle
13 chr12:8851800-8877200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr12:8852000-8855000 Enhancers Fetal Brain Male brain
15 chr12:8852000-8855200 Weak transcription Fetal Kidney kidney
16 chr12:8852000-8861800 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr12:8852400-8859600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr12:8852600-8855000 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr12:8852600-8862000 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr12:8852600-8874600 Weak transcription H9 Cell Line embryonic stem cell
21 chr12:8852600-8880000 Weak transcription HMEC breast
22 chr12:8852800-8859800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr12:8852800-8863800 Weak transcription H1 Cell Line embryonic stem cell
24 chr12:8852800-8864200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr12:8852800-8871400 Weak transcription Fetal Intestine Large intestine
26 chr12:8852800-8877200 Weak transcription Brain Cingulate Gyrus brain
27 chr12:8852800-8908600 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr12:8853000-8854800 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr12:8853000-8855800 Enhancers Colon Smooth Muscle Colon
30 chr12:8853000-8862000 Weak transcription Primary T cells from cord blood blood
31 chr12:8853000-8871800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr12:8853000-8873200 Weak transcription A549 lung
33 chr12:8853000-8875600 Weak transcription Brain Inferior Temporal Lobe brain
34 chr12:8853200-8854600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr12:8853200-8854600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr12:8853200-8854800 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr12:8853200-8855000 Weak transcription Stomach Smooth Muscle stomach
38 chr12:8853200-8855200 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr12:8853200-8855600 Enhancers Adipose Nuclei Adipose
40 chr12:8853200-8855800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr12:8853200-8856200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr12:8853200-8859800 Weak transcription Fetal Intestine Small intestine
43 chr12:8853200-8861200 Weak transcription HUVEC blood vessel
44 chr12:8853200-8861200 Weak transcription Osteobl bone
45 chr12:8853200-8861600 Weak transcription NHDF-Ad bronchial
46 chr12:8853200-8862000 Weak transcription Fetal Thymus thymus
47 chr12:8853200-8862000 Weak transcription Psoas Muscle Psoas
48 chr12:8853200-8868400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr12:8853200-8872400 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr12:8853200-8934000 Weak transcription K562 blood

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Last update: Aug 31, 2015