The 2.0 version of rSNPBase

Variant report

Variant rs58863166
Chromosome Location chr12:8882912-8882913
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:8852800-8908600 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr12:8853200-8934000 Weak transcription K562 blood
3 chr12:8862400-8894800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr12:8862400-8895000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr12:8862400-8902400 Weak transcription Primary T cells fromperipheralblood blood
6 chr12:8862600-8894800 Weak transcription Muscle Satellite Cultured Cells --
7 chr12:8862800-8905400 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr12:8862800-8908000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr12:8865000-8895200 Weak transcription Psoas Muscle Psoas
10 chr12:8865600-8887600 Weak transcription Rectal Smooth Muscle rectum
11 chr12:8865800-8888600 Weak transcription Brain Anterior Caudate brain
12 chr12:8866000-8895000 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr12:8866000-8896600 Weak transcription Brain Hippocampus Middle brain
14 chr12:8867200-8883600 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr12:8868200-8905400 Weak transcription Right Ventricle heart
16 chr12:8868800-8892800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr12:8870600-8883600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr12:8872000-8896600 Weak transcription HUVEC blood vessel
19 chr12:8874200-8888200 Weak transcription NHEK skin
20 chr12:8874200-8894800 Weak transcription HSMM muscle
21 chr12:8874400-8885400 Weak transcription NH-A brain
22 chr12:8874400-8888600 Weak transcription A549 lung
23 chr12:8874400-8892000 Weak transcription Primary B cells from peripheral blood blood
24 chr12:8875400-8884000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr12:8875600-8894800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr12:8875600-8895000 Weak transcription HSMMtube muscle
27 chr12:8875800-8933200 Weak transcription Fetal Kidney kidney
28 chr12:8876000-8887600 Weak transcription Colon Smooth Muscle Colon
29 chr12:8876200-8887200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr12:8876200-8887600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr12:8877400-8887800 Weak transcription Brain Substantia Nigra brain
32 chr12:8877600-8888400 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr12:8877600-8902600 Weak transcription Stomach Smooth Muscle stomach
34 chr12:8877800-8894800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr12:8877800-8904000 Weak transcription Fetal Brain Male brain
36 chr12:8878400-8904400 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr12:8878400-8923600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr12:8878400-8937200 Weak transcription Brain Cingulate Gyrus brain
39 chr12:8878800-8887800 Weak transcription Left Ventricle heart
40 chr12:8879800-8894800 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr12:8879800-8902400 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr12:8880200-8888400 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr12:8880400-8883000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr12:8880400-8883200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr12:8880600-8883200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr12:8880800-8883400 Strong transcription Hela-S3 cervix
47 chr12:8881200-8883400 ZNF genes & repeats Fetal Stomach stomach
48 chr12:8881200-8883600 Strong transcription Fetal Muscle Trunk muscle
49 chr12:8881600-8883000 Strong transcription Fetal Adrenal Gland Adrenal Gland
50 chr12:8881800-8888600 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015