The 2.0 version of rSNPBase

Variant report

Variant rs12297411
Chromosome Location chr12:8876247-8876248
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:8851800-8877200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr12:8852600-8880000 Weak transcription HMEC breast
3 chr12:8852800-8877200 Weak transcription Brain Cingulate Gyrus brain
4 chr12:8852800-8908600 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr12:8853200-8934000 Weak transcription K562 blood
6 chr12:8860000-8876400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr12:8860000-8881600 Weak transcription Spleen Spleen
8 chr12:8862200-8880000 Weak transcription Pancreas Pancrea
9 chr12:8862400-8877200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr12:8862400-8880000 Weak transcription Esophagus oesophagus
11 chr12:8862400-8894800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr12:8862400-8895000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr12:8862400-8902400 Weak transcription Primary T cells fromperipheralblood blood
14 chr12:8862600-8879000 Weak transcription Duodenum Mucosa Duodenum
15 chr12:8862600-8894800 Weak transcription Muscle Satellite Cultured Cells --
16 chr12:8862800-8879600 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr12:8862800-8880200 Weak transcription Primary monocytes fromperipheralblood blood
18 chr12:8862800-8881800 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr12:8862800-8905400 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr12:8862800-8908000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr12:8863800-8876400 Weak transcription Fetal Stomach stomach
22 chr12:8864000-8876400 Weak transcription Fetal Intestine Small intestine
23 chr12:8864000-8877800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr12:8865000-8895200 Weak transcription Psoas Muscle Psoas
25 chr12:8865400-8877200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr12:8865400-8877200 Weak transcription Lung lung
27 chr12:8865400-8877200 Weak transcription Ovary ovary
28 chr12:8865400-8877200 Weak transcription Stomach Smooth Muscle stomach
29 chr12:8865400-8878600 Weak transcription Gastric stomach
30 chr12:8865600-8877200 Weak transcription Brain Substantia Nigra brain
31 chr12:8865600-8887600 Weak transcription Rectal Smooth Muscle rectum
32 chr12:8865800-8888600 Weak transcription Brain Anterior Caudate brain
33 chr12:8866000-8880000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr12:8866000-8895000 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr12:8866000-8896600 Weak transcription Brain Hippocampus Middle brain
36 chr12:8866200-8879000 Strong transcription Cortex derived primary cultured neurospheres brain
37 chr12:8866400-8878000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr12:8866800-8877000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr12:8867200-8883600 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr12:8868200-8881600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr12:8868200-8905400 Weak transcription Right Ventricle heart
42 chr12:8868800-8892800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr12:8870400-8881600 Strong transcription Fetal Muscle Leg muscle
44 chr12:8870600-8883600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr12:8871800-8876600 Weak transcription Aorta Aorta
46 chr12:8871800-8877000 Weak transcription Fetal Brain Male brain
47 chr12:8871800-8878400 Strong transcription Fetal Adrenal Gland Adrenal Gland
48 chr12:8872000-8896600 Weak transcription HUVEC blood vessel
49 chr12:8872400-8878800 Strong transcription Thymus Thymus
50 chr12:8872600-8876400 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015