The 2.0 version of rSNPBase

Variant report

Variant rs7973476
Chromosome Location chr12:8865003-8865004
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:8851800-8873200 Weak transcription Fetal Muscle Trunk muscle
2 chr12:8851800-8877200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr12:8852600-8874600 Weak transcription H9 Cell Line embryonic stem cell
4 chr12:8852600-8880000 Weak transcription HMEC breast
5 chr12:8852800-8871400 Weak transcription Fetal Intestine Large intestine
6 chr12:8852800-8877200 Weak transcription Brain Cingulate Gyrus brain
7 chr12:8852800-8908600 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr12:8853000-8871800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr12:8853000-8873200 Weak transcription A549 lung
10 chr12:8853000-8875600 Weak transcription Brain Inferior Temporal Lobe brain
11 chr12:8853200-8868400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr12:8853200-8872400 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr12:8853200-8934000 Weak transcription K562 blood
14 chr12:8853400-8866400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr12:8853400-8866400 Weak transcription NHEK skin
16 chr12:8854000-8866200 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr12:8855000-8870200 Weak transcription Fetal Brain Male brain
18 chr12:8855200-8868000 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr12:8855600-8867800 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr12:8855600-8875200 Weak transcription Fetal Kidney kidney
21 chr12:8856400-8866200 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr12:8860000-8876400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr12:8860000-8881600 Weak transcription Spleen Spleen
24 chr12:8860200-8866000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr12:8860200-8868000 Weak transcription Fetal Brain Female brain
26 chr12:8862000-8865400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr12:8862200-8865200 Weak transcription Gastric stomach
28 chr12:8862200-8870400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr12:8862200-8880000 Weak transcription Pancreas Pancrea
30 chr12:8862400-8865200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr12:8862400-8865200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr12:8862400-8865200 Weak transcription Aorta Aorta
33 chr12:8862400-8865200 Weak transcription Brain Anterior Caudate brain
34 chr12:8862400-8865200 Weak transcription Rectal Smooth Muscle rectum
35 chr12:8862400-8866400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr12:8862400-8866400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr12:8862400-8866400 Weak transcription Dnd41 blood
38 chr12:8862400-8866600 Weak transcription Placenta Placenta
39 chr12:8862400-8867400 Weak transcription Fetal Lung lung
40 chr12:8862400-8870400 Weak transcription HSMM muscle
41 chr12:8862400-8871200 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr12:8862400-8871400 Weak transcription HSMMtube muscle
43 chr12:8862400-8871600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr12:8862400-8872400 Weak transcription Thymus Thymus
45 chr12:8862400-8875200 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr12:8862400-8875200 Weak transcription Colon Smooth Muscle Colon
47 chr12:8862400-8877200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr12:8862400-8880000 Weak transcription Esophagus oesophagus
49 chr12:8862400-8894800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr12:8862400-8895000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015