Variant report

Variant	rs12302099
Chromosome Location	chr12:8808940-8808941
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10128818	1.00[JPT][hapmap]
rs10505736	1.00[JPT][hapmap]
rs11046858	1.00[JPT][hapmap]
rs11046887	1.00[JPT][hapmap]
rs11046900	1.00[JPT][hapmap]
rs11047042	1.00[JPT][hapmap]
rs11612882	1.00[JPT][hapmap]
rs11616092	1.00[JPT][hapmap]
rs12297411	1.00[JPT][hapmap]
rs12301158	0.80[LWK][hapmap]
rs12303273	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12306245	1.00[JPT][hapmap]
rs12307610	1.00[JPT][hapmap]
rs12311263	1.00[JPT][hapmap]
rs12311861	1.00[JPT][hapmap]
rs12312128	1.00[JPT][hapmap]
rs12314360	1.00[JPT][hapmap]
rs12314822	1.00[JPT][hapmap]
rs12318215	1.00[JPT][hapmap]
rs12322866	0.83[LWK][hapmap];0.82[MKK][hapmap]
rs12809190	0.87[EUR][1000 genomes]
rs12811351	0.87[EUR][1000 genomes]
rs12812133	0.91[EUR][1000 genomes]
rs12812856	0.87[EUR][1000 genomes]
rs12815106	0.90[EUR][1000 genomes]
rs12817900	0.87[EUR][1000 genomes]
rs12822141	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12824174	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12827693	0.90[EUR][1000 genomes]
rs12827867	0.90[EUR][1000 genomes]
rs12827904	0.90[EUR][1000 genomes]
rs12829580	0.90[EUR][1000 genomes]
rs12833793	0.87[EUR][1000 genomes]
rs1476902	1.00[JPT][hapmap]
rs16917739	1.00[JPT][hapmap]
rs16917746	1.00[JPT][hapmap]
rs17802192	0.85[EUR][1000 genomes]
rs2159889	1.00[JPT][hapmap]
rs2377491	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34716337	0.85[EUR][1000 genomes]
rs34720246	0.87[EUR][1000 genomes]
rs34817631	0.91[EUR][1000 genomes]
rs34976145	0.91[EUR][1000 genomes]
rs34978963	0.84[EUR][1000 genomes]
rs35253464	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs35337965	0.87[EUR][1000 genomes]
rs35365089	0.90[EUR][1000 genomes]
rs35379247	0.85[EUR][1000 genomes]
rs35565662	0.85[EUR][1000 genomes]
rs35701636	0.91[EUR][1000 genomes]
rs35818804	0.87[EUR][1000 genomes]
rs35866343	0.84[EUR][1000 genomes]
rs35896395	0.87[EUR][1000 genomes]
rs56941823	0.88[EUR][1000 genomes]
rs6487313	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.85[MKK][hapmap];0.83[TSI][hapmap];0.88[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs6487333	1.00[JPT][hapmap]
rs6487347	1.00[JPT][hapmap]
rs6487354	1.00[JPT][hapmap]
rs7132012	1.00[JPT][hapmap]
rs7139182	1.00[JPT][hapmap]
rs71447526	0.84[EUR][1000 genomes]
rs71447527	0.84[EUR][1000 genomes]
rs71447528	0.80[EUR][1000 genomes]
rs7303757	1.00[JPT][hapmap]
rs7316051	1.00[JPT][hapmap]
rs73244416	0.91[EUR][1000 genomes]
rs7960582	1.00[JPT][hapmap]
rs7968935	1.00[JPT][hapmap]
rs7977372	1.00[JPT][hapmap]

SNP	Gene	Cis/trans	Tissue	Source
rs12302099	FAM80B	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:8789600-8813400	Weak transcription	Fetal Muscle Leg	muscle
2	chr12:8792600-8814600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr12:8798000-8810400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr12:8798400-8810000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr12:8799200-8813600	Weak transcription	Fetal Muscle Trunk	muscle
6	chr12:8799800-8810400	Weak transcription	NH-A	brain
7	chr12:8801200-8810600	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr12:8801600-8809800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr12:8802400-8810600	Weak transcription	NHDF-Ad	bronchial
10	chr12:8806600-8810200	Weak transcription	Placenta	Placenta
11	chr12:8807800-8811000	Weak transcription	Fetal Thymus	thymus
12	chr12:8808400-8809400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr12:8808400-8810200	Weak transcription	HSMM	muscle
14	chr12:8808400-8810400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr12:8808400-8810400	Weak transcription	NHEK	skin
16	chr12:8808600-8810200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr12:8808600-8810400	Weak transcription	Hela-S3	cervix
18	chr12:8808600-8810600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
19	chr12:8808600-8811200	Weak transcription	HSMMtube	muscle
20	chr12:8808800-8809600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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