Variant report

Variant	rs59436468
Chromosome Location	chr3:18009870-18009871
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs58530294	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58544197	1.00[AMR][1000 genomes]
rs61587692	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73817390	1.00[AMR][1000 genomes]
rs73817392	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73817393	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73817421	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73817422	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73817433	0.81[AFR][1000 genomes]
rs73817435	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73817441	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73817445	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73817454	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73819818	1.00[AMR][1000 genomes]
rs73819819	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73819878	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73819884	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7634870	1.00[AMR][1000 genomes]
rs7644283	1.00[AMR][1000 genomes]
rs7647770	1.00[AMR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:18005200-18010000	Enhancers	Dnd41	blood
2	chr3:18008600-18010000	Enhancers	Adipose Nuclei	Adipose
3	chr3:18008600-18010000	Enhancers	Colon Smooth Muscle	Colon
4	chr3:18009200-18010000	Enhancers	Brain Inferior Temporal Lobe	brain
5	chr3:18009600-18010000	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr3:18009600-18012200	Enhancers	Hela-S3	cervix
7	chr3:18009800-18013000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr3:18009800-18013600	Weak transcription	Thymus	Thymus
9	chr3:18009800-18014400	Weak transcription	HUES64 Cell Line	embryonic stem cell
10	chr3:18009800-18014600	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr3:18009800-18014600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr3:18009800-18019000	Weak transcription	Fetal Thymus	thymus

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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