The 2.0 version of rSNPBase

Variant report

Variant rs59553995
Chromosome Location chr4:26362061-26362062
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:26323800-26374400 Weak transcription Lung lung
2 chr4:26325000-26374200 Weak transcription Fetal Intestine Large intestine
3 chr4:26344200-26370800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr4:26344200-26374200 Weak transcription Placenta Placenta
5 chr4:26344800-26368000 Weak transcription Fetal Intestine Small intestine
6 chr4:26345200-26362600 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr4:26347800-26362600 Weak transcription Fetal Lung lung
8 chr4:26348000-26362600 Weak transcription Fetal Brain Male brain
9 chr4:26348000-26374400 Weak transcription Fetal Stomach stomach
10 chr4:26351000-26362400 Weak transcription Right Ventricle heart
11 chr4:26351000-26374200 Weak transcription Right Atrium heart
12 chr4:26356400-26364800 Weak transcription Esophagus oesophagus
13 chr4:26358000-26362200 Weak transcription H1 Cell Line embryonic stem cell
14 chr4:26358000-26362200 Weak transcription Primary T cells fromperipheralblood blood
15 chr4:26358000-26362200 Weak transcription Left Ventricle heart
16 chr4:26358000-26362200 Weak transcription Psoas Muscle Psoas
17 chr4:26358000-26362400 Weak transcription Fetal Thymus thymus
18 chr4:26358000-26362400 Weak transcription Small Intestine intestine
19 chr4:26358000-26362600 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr4:26358000-26362600 Weak transcription Duodenum Mucosa Duodenum
21 chr4:26358000-26362600 Weak transcription Thymus Thymus
22 chr4:26358000-26362600 Weak transcription GM12878-XiMat blood
23 chr4:26358000-26362800 Weak transcription Colon Smooth Muscle Colon
24 chr4:26358000-26363400 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr4:26358000-26363400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr4:26358000-26363600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr4:26358000-26363800 Weak transcription NHLF lung
28 chr4:26358000-26368000 Weak transcription Fetal Muscle Leg muscle
29 chr4:26358000-26369600 Weak transcription Adipose Nuclei Adipose
30 chr4:26358000-26370600 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr4:26358000-26373800 Weak transcription Rectal Smooth Muscle rectum
32 chr4:26358000-26374000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr4:26358000-26374200 Weak transcription Primary B cells from peripheral blood blood
34 chr4:26358000-26374200 Weak transcription Spleen Spleen
35 chr4:26358000-26387600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr4:26358000-26390600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr4:26358200-26362200 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr4:26358200-26362800 Weak transcription Muscle Satellite Cultured Cells --
39 chr4:26358200-26363000 Weak transcription NH-A brain
40 chr4:26358200-26363600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr4:26358200-26370200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr4:26358400-26362600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr4:26358400-26362800 Weak transcription Primary T cells from cord blood blood
44 chr4:26358400-26369600 Weak transcription Primary B cells from cord blood blood
45 chr4:26358600-26362200 Weak transcription Fetal Heart heart
46 chr4:26358600-26362600 Weak transcription Liver Liver
47 chr4:26358600-26362600 Weak transcription Brain Anterior Caudate brain
48 chr4:26358600-26363600 Weak transcription Brain Angular Gyrus brain
49 chr4:26358800-26362200 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr4:26358800-26362600 Weak transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015