Variant report

Variant	rs73810231
Chromosome Location	chr4:26416935-26416936
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:26320713..26323775-chr4:26414694..26418246,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000168214	Chromatin interaction

rs_ID	r²[population]
rs56213973	0.89[AFR][1000 genomes]
rs59553995	0.81[AFR][1000 genomes]
rs59647814	1.00[AFR][1000 genomes]
rs59840347	0.89[AFR][1000 genomes]
rs60841839	1.00[AFR][1000 genomes]
rs73809409	0.89[AFR][1000 genomes]
rs73809412	0.89[AFR][1000 genomes]
rs73809414	0.89[AFR][1000 genomes]
rs73809416	0.89[AFR][1000 genomes]
rs73809419	0.89[AFR][1000 genomes]
rs73809420	1.00[AFR][1000 genomes]
rs73809422	1.00[AFR][1000 genomes]
rs73810220	1.00[AFR][1000 genomes]
rs73810221	0.89[AFR][1000 genomes]
rs73810223	1.00[AFR][1000 genomes]
rs73810226	1.00[AFR][1000 genomes]
rs73810229	1.00[AFR][1000 genomes]
rs73810904	1.00[AFR][1000 genomes]
rs73810906	1.00[AFR][1000 genomes]
rs73810907	1.00[AFR][1000 genomes]
rs73810910	1.00[AFR][1000 genomes]
rs7658107	1.00[AFR][1000 genomes]
rs7665003	0.90[AFR][1000 genomes]

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26375200-26439200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr4:26381600-26439800	Weak transcription	Spleen	Spleen
3	chr4:26387200-26436000	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr4:26399800-26437200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr4:26403000-26424800	Weak transcription	Fetal Brain Female	brain
6	chr4:26404400-26436000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr4:26404600-26418000	Weak transcription	Small Intestine	intestine
8	chr4:26408000-26439000	Weak transcription	Hela-S3	cervix
9	chr4:26408400-26422600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr4:26408400-26427000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr4:26408400-26428400	Weak transcription	Sigmoid Colon	Sigmoid Colon
12	chr4:26408400-26431000	Weak transcription	Fetal Kidney	kidney
13	chr4:26408400-26431400	Weak transcription	Esophagus	oesophagus
14	chr4:26408400-26442000	Weak transcription	Aorta	Aorta
15	chr4:26408600-26417400	Weak transcription	Fetal Muscle Trunk	muscle
16	chr4:26408600-26418000	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr4:26408600-26422200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr4:26408600-26422600	Weak transcription	Thymus	Thymus
19	chr4:26408600-26425800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
20	chr4:26408600-26426800	Weak transcription	Brain Germinal Matrix	brain
21	chr4:26408600-26430800	Weak transcription	HUVEC	blood vessel
22	chr4:26408600-26430800	Weak transcription	K562	blood
23	chr4:26408800-26417400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
24	chr4:26408800-26417800	Weak transcription	HepG2	liver
25	chr4:26408800-26421600	Weak transcription	A549	lung
26	chr4:26408800-26421800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
27	chr4:26408800-26422200	Weak transcription	Primary B cells from peripheral blood	blood
28	chr4:26408800-26422200	Weak transcription	Primary T cells fromperipheralblood	blood
29	chr4:26408800-26426600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
30	chr4:26408800-26432200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
31	chr4:26409000-26417000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
32	chr4:26409000-26417000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr4:26409000-26417200	Weak transcription	Fetal Intestine Large	intestine
34	chr4:26409000-26417200	Weak transcription	Rectal Mucosa Donor 29	rectum
35	chr4:26409000-26417200	Weak transcription	Rectal Mucosa Donor 31	rectum
36	chr4:26409000-26417400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr4:26409000-26422400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr4:26409000-26426000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
39	chr4:26409000-26431000	Weak transcription	NHEK	skin
40	chr4:26409000-26431600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr4:26409000-26431600	Weak transcription	HMEC	breast
42	chr4:26409800-26423400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
43	chr4:26410000-26417200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
44	chr4:26410400-26417600	Weak transcription	HSMMtube	muscle
45	chr4:26410600-26417000	Weak transcription	Primary neutrophils fromperipheralblood	blood
46	chr4:26410600-26422200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
47	chr4:26411600-26421600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
48	chr4:26412400-26421400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
49	chr4:26412400-26422400	Weak transcription	Brain Substantia Nigra	brain
50	chr4:26412800-26417800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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