Variant report

Variant	rs73810221
Chromosome Location	chr4:26388284-26388285
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:26321077..26324046-chr4:26386380..26389360,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000168214	Chromatin interaction

rs_ID	r²[population]
rs58403823	0.87[AFR][1000 genomes]
rs59647814	0.89[AFR][1000 genomes]
rs60841839	0.89[AFR][1000 genomes]
rs73809420	0.89[AFR][1000 genomes]
rs73809422	0.89[AFR][1000 genomes]
rs73810220	0.89[AFR][1000 genomes]
rs73810223	0.89[AFR][1000 genomes]
rs73810226	0.89[AFR][1000 genomes]
rs73810229	0.89[AFR][1000 genomes]
rs73810231	0.89[AFR][1000 genomes]
rs73810904	0.89[AFR][1000 genomes]
rs73810906	0.89[AFR][1000 genomes]
rs73810907	0.89[AFR][1000 genomes]
rs73810910	0.89[AFR][1000 genomes]
rs7658107	0.89[AFR][1000 genomes]

Chromatin state (count:119 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26358000-26390600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr4:26369200-26389000	Weak transcription	Fetal Muscle Trunk	muscle
3	chr4:26371600-26389200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr4:26371600-26408200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr4:26373200-26388600	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr4:26374400-26388600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr4:26374600-26389200	Weak transcription	Fetal Intestine Large	intestine
8	chr4:26374600-26389200	Weak transcription	Left Ventricle	heart
9	chr4:26374600-26390000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr4:26374600-26390400	Weak transcription	Fetal Intestine Small	intestine
11	chr4:26374600-26390400	Weak transcription	Thymus	Thymus
12	chr4:26374600-26390600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr4:26374600-26390600	Weak transcription	Pancreas	Pancrea
14	chr4:26374600-26396800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr4:26374600-26404200	Weak transcription	Right Ventricle	heart
16	chr4:26374800-26389200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
17	chr4:26374800-26389200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr4:26374800-26390000	Weak transcription	HUVEC	blood vessel
19	chr4:26374800-26392600	Weak transcription	Fetal Brain Male	brain
20	chr4:26374800-26403800	Weak transcription	Skeletal Muscle Female	skeletal muscle
21	chr4:26375000-26404000	Weak transcription	Skeletal Muscle Male	skeletal muscle
22	chr4:26375200-26388600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr4:26375200-26388600	Weak transcription	Osteobl	bone
24	chr4:26375200-26388800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
25	chr4:26375200-26389200	Weak transcription	NH-A	brain
26	chr4:26375200-26389600	Weak transcription	HepG2	liver
27	chr4:26375200-26391000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr4:26375200-26406200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr4:26375200-26439200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr4:26375400-26389600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
31	chr4:26375400-26407800	Weak transcription	Rectal Mucosa Donor 29	rectum
32	chr4:26375400-26408000	Weak transcription	H9 Cell Line	embryonic stem cell
33	chr4:26375400-26408000	Weak transcription	Fetal Stomach	stomach
34	chr4:26375600-26388600	Weak transcription	Brain Germinal Matrix	brain
35	chr4:26375600-26404000	Weak transcription	Duodenum Mucosa	Duodenum
36	chr4:26376800-26399800	Weak transcription	Lung	lung
37	chr4:26377600-26389200	Weak transcription	H1 Cell Line	embryonic stem cell
38	chr4:26377600-26390600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr4:26378000-26389200	Weak transcription	Fetal Muscle Leg	muscle
40	chr4:26379200-26388800	Weak transcription	Primary hematopoietic stem cells	blood
41	chr4:26379200-26393400	Weak transcription	NHLF	lung
42	chr4:26379400-26407800	Weak transcription	Rectal Smooth Muscle	rectum
43	chr4:26379600-26408200	Weak transcription	Fetal Kidney	kidney
44	chr4:26379800-26389200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
45	chr4:26379800-26392600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
46	chr4:26380000-26397800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
47	chr4:26380200-26388600	Weak transcription	Monocytes-CD14+_RO01746	blood
48	chr4:26380200-26389200	Weak transcription	Primary B cells from cord blood	blood
49	chr4:26380200-26396600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
50	chr4:26380200-26398400	Weak transcription	Brain Anterior Caudate	brain

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