Variant report

Variant	rs73810220
Chromosome Location	chr4:26387193-26387194
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:26321077..26324046-chr4:26386380..26389360,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000168214	Chromatin interaction

rs_ID	r²[population]
rs56213973	0.89[AFR][1000 genomes]
rs59553995	0.81[AFR][1000 genomes]
rs59647814	1.00[AFR][1000 genomes]
rs59840347	0.89[AFR][1000 genomes]
rs60841839	1.00[AFR][1000 genomes]
rs73809409	0.89[AFR][1000 genomes]
rs73809412	0.89[AFR][1000 genomes]
rs73809414	0.89[AFR][1000 genomes]
rs73809416	0.89[AFR][1000 genomes]
rs73809419	0.89[AFR][1000 genomes]
rs73809420	1.00[AFR][1000 genomes]
rs73809422	1.00[AFR][1000 genomes]
rs73810221	0.89[AFR][1000 genomes]
rs73810223	1.00[AFR][1000 genomes]
rs73810226	1.00[AFR][1000 genomes]
rs73810229	1.00[AFR][1000 genomes]
rs73810231	1.00[AFR][1000 genomes]
rs73810904	1.00[AFR][1000 genomes]
rs73810906	1.00[AFR][1000 genomes]
rs73810907	1.00[AFR][1000 genomes]
rs73810910	1.00[AFR][1000 genomes]
rs7658107	1.00[AFR][1000 genomes]
rs7665003	0.90[AFR][1000 genomes]

Chromatin state (count:119 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26358000-26387600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr4:26358000-26390600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr4:26369200-26389000	Weak transcription	Fetal Muscle Trunk	muscle
4	chr4:26371600-26389200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr4:26371600-26408200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr4:26371800-26387600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr4:26373200-26388600	Enhancers	Primary neutrophils fromperipheralblood	blood
8	chr4:26374400-26388600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
9	chr4:26374600-26387800	Weak transcription	Right Atrium	heart
10	chr4:26374600-26389200	Weak transcription	Fetal Intestine Large	intestine
11	chr4:26374600-26389200	Weak transcription	Left Ventricle	heart
12	chr4:26374600-26390000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr4:26374600-26390400	Weak transcription	Fetal Intestine Small	intestine
14	chr4:26374600-26390400	Weak transcription	Thymus	Thymus
15	chr4:26374600-26390600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr4:26374600-26390600	Weak transcription	Pancreas	Pancrea
17	chr4:26374600-26396800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr4:26374600-26404200	Weak transcription	Right Ventricle	heart
19	chr4:26374800-26388200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr4:26374800-26389200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
21	chr4:26374800-26389200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
22	chr4:26374800-26390000	Weak transcription	HUVEC	blood vessel
23	chr4:26374800-26392600	Weak transcription	Fetal Brain Male	brain
24	chr4:26374800-26403800	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr4:26375000-26404000	Weak transcription	Skeletal Muscle Male	skeletal muscle
26	chr4:26375200-26387400	Weak transcription	HSMM	muscle
27	chr4:26375200-26387600	Weak transcription	NHEK	skin
28	chr4:26375200-26387800	Weak transcription	HUES48 Cell Line	embryonic stem cell
29	chr4:26375200-26388200	Weak transcription	Adipose Nuclei	Adipose
30	chr4:26375200-26388600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr4:26375200-26388600	Weak transcription	Osteobl	bone
32	chr4:26375200-26388800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
33	chr4:26375200-26389200	Weak transcription	NH-A	brain
34	chr4:26375200-26389600	Weak transcription	HepG2	liver
35	chr4:26375200-26391000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr4:26375200-26406200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
37	chr4:26375200-26439200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
38	chr4:26375400-26389600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
39	chr4:26375400-26407800	Weak transcription	Rectal Mucosa Donor 29	rectum
40	chr4:26375400-26408000	Weak transcription	H9 Cell Line	embryonic stem cell
41	chr4:26375400-26408000	Weak transcription	Fetal Stomach	stomach
42	chr4:26375600-26388600	Weak transcription	Brain Germinal Matrix	brain
43	chr4:26375600-26404000	Weak transcription	Duodenum Mucosa	Duodenum
44	chr4:26375800-26387800	Weak transcription	Primary T cells from cord blood	blood
45	chr4:26376800-26399800	Weak transcription	Lung	lung
46	chr4:26377200-26387600	Weak transcription	HUES6 Cell Line	embryonic stem cell
47	chr4:26377600-26389200	Weak transcription	H1 Cell Line	embryonic stem cell
48	chr4:26377600-26390600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr4:26378000-26389200	Weak transcription	Fetal Muscle Leg	muscle
50	chr4:26378800-26387600	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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