Variant report

rSNPs within LD-proxies of this variant (count:5)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519215	chr2:21473751-21502727	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
2	nsv1011486	chr2:21475803-22364002	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv535602	chr2:21475803-22364002	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	nsv523572	chr2:21489083-21493269	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
5	nsv518468	chr2:21489083-21502727	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21479000-21490400	Weak transcription	Spleen	Spleen
2	chr2:21479400-21494800	Enhancers	Brain Substantia Nigra	brain
3	chr2:21483400-21490600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr2:21485000-21490400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr2:21488800-21490400	Weak transcription	K562	blood
6	chr2:21488800-21490800	Weak transcription	Aorta	Aorta
7	chr2:21489000-21492600	Enhancers	Ovary	ovary
8	chr2:21489600-21491000	Enhancers	Brain Inferior Temporal Lobe	brain
9	chr2:21489600-21495400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr2:21489800-21492000	Enhancers	Pancreas	Pancrea
11	chr2:21489800-21492200	Enhancers	Brain Hippocampus Middle	brain
12	chr2:21489800-21492400	Enhancers	Brain Angular Gyrus	brain
13	chr2:21489800-21494200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
14	chr2:21489800-21494600	Enhancers	Brain Anterior Caudate	brain
15	chr2:21489800-21494600	Enhancers	Brain Cingulate Gyrus	brain
16	chr2:21489800-21495200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr2:21490200-21490600	Enhancers	Fetal Lung	lung
18	chr2:21490200-21490800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr2:21490200-21490800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr2:21490200-21491200	Bivalent Enhancer	Fetal Stomach	stomach
21	chr2:21490200-21494400	Enhancers	Fetal Kidney	kidney

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