Variant report

Variant	rs59698766
Chromosome Location	chr7:103473150-103473151
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10487170	1.00[AMR][1000 genomes]
rs11973365	1.00[AMR][1000 genomes]
rs11973718	1.00[AMR][1000 genomes]
rs11973791	1.00[AMR][1000 genomes]
rs11976809	1.00[AMR][1000 genomes]
rs11978937	1.00[AMR][1000 genomes]
rs11984057	1.00[AMR][1000 genomes]
rs28394382	1.00[AMR][1000 genomes]
rs34358617	1.00[AMR][1000 genomes]
rs73712264	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv934055	chr7:103462527-103473944	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103461200-103482400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:103466600-103481800	Weak transcription	K562	blood
3	chr7:103472000-103473200	Strong transcription	HepG2	liver

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links