Variant report

Variant	rs59763146
Chromosome Location	chr13:54088581-54088582
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11148276	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs56160835	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496488	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496490	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496491	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496494	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496499	1.00[AMR][1000 genomes]
rs73498405	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73498408	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73498409	0.87[AMR][1000 genomes]
rs74089033	0.81[AFR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:54086600-54088800	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr13:54087000-54088600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
3	chr13:54087000-54088800	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr13:54087000-54088800	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr13:54087400-54088800	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr13:54087800-54088600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr13:54087800-54088600	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr13:54088000-54088600	Weak transcription	Right Atrium	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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