Variant report

Variant	rs73496490
Chromosome Location	chr13:54088901-54088902
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11148276	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs56160835	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59763146	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496488	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496491	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496494	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496499	1.00[AMR][1000 genomes]
rs73498405	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73498408	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73498409	0.87[AMR][1000 genomes]
rs74089033	0.81[AFR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:54088600-54089000	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr13:54088800-54094200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr13:54088800-54094200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr13:54088800-54094200	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr13:54088800-54094200	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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