Variant report

Variant	rs59783133
Chromosome Location	chr4:118739690-118739691
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs12651118	1.00[AMR][1000 genomes]
rs72911368	1.00[AMR][1000 genomes]
rs72913437	1.00[AMR][1000 genomes]
rs72913442	1.00[AMR][1000 genomes]
rs72913445	1.00[AMR][1000 genomes]
rs72913461	1.00[AMR][1000 genomes]
rs72915443	1.00[AMR][1000 genomes]
rs7699041	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879838	chr4:118681261-118753062	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:118736200-118739800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr4:118737600-118739800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr4:118739400-118740400	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr4:118739600-118740200	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr4:118739600-118740200	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr4:118739600-118740600	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr4:118739600-118741000	Enhancers	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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