Variant report

Variant	rs72913437
Chromosome Location	chr4:118821841-118821842
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:118820589..118823365-chr4:118825346..118827075,2	MCF-7	breast:
2	chr4:118817633..118820378-chr4:118820804..118823749,2	K562	blood:

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10004800	1.00[EUR][1000 genomes]
rs10034646	1.00[EUR][1000 genomes]
rs12651118	1.00[AMR][1000 genomes]
rs59783133	1.00[AMR][1000 genomes]
rs72903395	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72905214	1.00[EUR][1000 genomes]
rs72907133	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72911368	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72911370	0.93[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72913439	0.93[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72913442	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72913445	1.00[AMR][1000 genomes]
rs72913447	1.00[EUR][1000 genomes]
rs72913461	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72915443	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7699041	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv482390	chr4:118804378-118944823	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:118821000-118822400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr4:118821200-118822800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr4:118821200-118823000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr4:118821200-118823800	Enhancers	Primary neutrophils fromperipheralblood	blood
5	chr4:118821200-118824400	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr4:118821400-118822000	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr4:118821400-118822000	Enhancers	Gastric	stomach
8	chr4:118821400-118823000	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr4:118821400-118823000	Enhancers	Monocytes-CD14+_RO01746	blood
10	chr4:118821400-118823200	Enhancers	Stomach Mucosa	stomach
11	chr4:118821600-118822400	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr4:118821600-118822400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr4:118821600-118822800	Enhancers	ES-I3 Cell Line	embryonic stem cell
14	chr4:118821600-118822800	Enhancers	HUES64 Cell Line	embryonic stem cell
15	chr4:118821600-118822800	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr4:118821600-118823000	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr4:118821600-118824200	Weak transcription	H9 Cell Line	embryonic stem cell
18	chr4:118821800-118822400	Enhancers	H1 Cell Line	embryonic stem cell
19	chr4:118821800-118822600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr4:118821800-118822800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
21	chr4:118821800-118822800	Enhancers	Pancreatic Islets	Pancreatic Islet

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