Variant report

Variant	rs7699041
Chromosome Location	chr4:118902777-118902778
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10004800	1.00[EUR][1000 genomes]
rs10034646	1.00[EUR][1000 genomes]
rs12651118	1.00[AMR][1000 genomes]
rs17515651	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59783133	1.00[AMR][1000 genomes]
rs60418385	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72903395	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72905214	1.00[EUR][1000 genomes]
rs72907133	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72911368	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72911370	1.00[EUR][1000 genomes]
rs72913437	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72913439	1.00[EUR][1000 genomes]
rs72913442	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72913445	1.00[AMR][1000 genomes]
rs72913447	1.00[EUR][1000 genomes]
rs72913461	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72915443	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv482390	chr4:118804378-118944823	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
2	nsv519017	chr4:118828807-119771481	Strong transcription Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:118901400-118903400	ZNF genes & repeats	Dnd41	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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