Variant report

Variant	rs59812251
Chromosome Location	chr2:67159562-67159563
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1121247	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1362477	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1420366	0.87[EUR][1000 genomes]
rs6546273	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6725675	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7573989	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7574079	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762259	chr2:67109728-67165987	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:67158200-67164000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr2:67158400-67162200	Weak transcription	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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