The 2.0 version of rSNPBase

Variant report

Variant rs59820001
Chromosome Location chr7:65394981-65394982
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:65345200-65419000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr7:65366400-65406800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr7:65366800-65403600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr7:65368800-65403600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr7:65368800-65418800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr7:65368800-65419000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr7:65369600-65403600 Weak transcription Fetal Stomach stomach
8 chr7:65369600-65405800 Weak transcription NHEK skin
9 chr7:65373000-65403200 Weak transcription A549 lung
10 chr7:65373800-65424000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr7:65374800-65402800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr7:65375000-65418800 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr7:65375400-65396600 Weak transcription Liver Liver
14 chr7:65375600-65419800 Weak transcription HSMMtube muscle
15 chr7:65377600-65402600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr7:65379200-65419000 Weak transcription Fetal Thymus thymus
17 chr7:65381800-65420200 Weak transcription Primary B cells from peripheral blood blood
18 chr7:65382000-65420600 Weak transcription Primary B cells from cord blood blood
19 chr7:65382800-65419800 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr7:65383200-65419000 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr7:65383800-65419600 Weak transcription GM12878-XiMat blood
22 chr7:65384000-65405600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr7:65384400-65401800 Weak transcription Dnd41 blood
24 chr7:65385200-65401800 Weak transcription Fetal Muscle Leg muscle
25 chr7:65385600-65396800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr7:65389400-65396600 Weak transcription Psoas Muscle Psoas
27 chr7:65389400-65406000 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr7:65389400-65423800 Weak transcription Aorta Aorta
29 chr7:65390400-65403800 Weak transcription Adipose Nuclei Adipose
30 chr7:65390400-65419000 Weak transcription Thymus Thymus
31 chr7:65390600-65423800 Weak transcription Gastric stomach
32 chr7:65390800-65395200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr7:65390800-65401600 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr7:65392600-65418400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr7:65392800-65395000 Weak transcription Duodenum Mucosa Duodenum
36 chr7:65392800-65396800 Weak transcription Lung lung
37 chr7:65392800-65396800 Weak transcription HepG2 liver
38 chr7:65392800-65397000 Weak transcription Left Ventricle heart
39 chr7:65392800-65402200 Weak transcription Primary T cells from cord blood blood
40 chr7:65392800-65412600 Weak transcription Pancreas Pancrea
41 chr7:65393000-65401400 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr7:65393000-65411800 Weak transcription Ovary ovary
43 chr7:65393200-65419600 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr7:65393400-65401400 Weak transcription Primary hematopoietic stem cells blood
45 chr7:65393400-65419000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr7:65393800-65395400 Weak transcription Fetal Lung lung
47 chr7:65393800-65400200 Weak transcription Fetal Intestine Small intestine
48 chr7:65393800-65403600 Weak transcription Fetal Intestine Large intestine
49 chr7:65394000-65395600 Enhancers K562 blood
50 chr7:65394000-65403200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015