The 2.0 version of rSNPBase

Variant report

Variant rs56955188
Chromosome Location chr7:65394327-65394328
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:65339600-65394400 Weak transcription HMEC breast
2 chr7:65345200-65419000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr7:65366400-65406800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr7:65366800-65403600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr7:65367800-65394400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr7:65368800-65403600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr7:65368800-65418800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr7:65368800-65419000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr7:65369600-65403600 Weak transcription Fetal Stomach stomach
10 chr7:65369600-65405800 Weak transcription NHEK skin
11 chr7:65373000-65403200 Weak transcription A549 lung
12 chr7:65373800-65424000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr7:65374800-65402800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr7:65375000-65418800 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr7:65375400-65396600 Weak transcription Liver Liver
16 chr7:65375600-65419800 Weak transcription HSMMtube muscle
17 chr7:65377600-65402600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr7:65379200-65419000 Weak transcription Fetal Thymus thymus
19 chr7:65381800-65420200 Weak transcription Primary B cells from peripheral blood blood
20 chr7:65382000-65420600 Weak transcription Primary B cells from cord blood blood
21 chr7:65382800-65419800 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr7:65383200-65419000 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr7:65383800-65419600 Weak transcription GM12878-XiMat blood
24 chr7:65384000-65405600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr7:65384400-65401800 Weak transcription Dnd41 blood
26 chr7:65385200-65401800 Weak transcription Fetal Muscle Leg muscle
27 chr7:65385600-65396800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr7:65389400-65396600 Weak transcription Psoas Muscle Psoas
29 chr7:65389400-65406000 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr7:65389400-65423800 Weak transcription Aorta Aorta
31 chr7:65390400-65403800 Weak transcription Adipose Nuclei Adipose
32 chr7:65390400-65419000 Weak transcription Thymus Thymus
33 chr7:65390600-65423800 Weak transcription Gastric stomach
34 chr7:65390800-65395200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr7:65390800-65401600 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr7:65392600-65418400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr7:65392800-65395000 Weak transcription Duodenum Mucosa Duodenum
38 chr7:65392800-65396800 Weak transcription Lung lung
39 chr7:65392800-65396800 Weak transcription HepG2 liver
40 chr7:65392800-65397000 Weak transcription Left Ventricle heart
41 chr7:65392800-65402200 Weak transcription Primary T cells from cord blood blood
42 chr7:65392800-65412600 Weak transcription Pancreas Pancrea
43 chr7:65393000-65401400 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr7:65393000-65411800 Weak transcription Ovary ovary
45 chr7:65393200-65419600 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr7:65393400-65401400 Weak transcription Primary hematopoietic stem cells blood
47 chr7:65393400-65419000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr7:65393800-65395400 Weak transcription Fetal Lung lung
49 chr7:65393800-65400200 Weak transcription Fetal Intestine Small intestine
50 chr7:65393800-65403600 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015