Variant report

Variant rs59908019
Chromosome Location chr12:8997462-8997463
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:8982200-9022000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr12:8983400-9017600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr12:8983800-8999800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr12:8987600-9004200 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr12:8987600-9040000 Weak transcription H1 Cell Line embryonic stem cell
6 chr12:8987800-9002800 Weak transcription H9 Cell Line embryonic stem cell
7 chr12:8987800-9004800 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr12:8987800-9012800 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr12:8988200-9012800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr12:8994800-9016600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr12:8996000-9007000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr12:8996000-9040000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr12:8996200-9001200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr12:8997000-8997600 Enhancers Brain Anterior Caudate brain
15 chr12:8997000-8998000 Enhancers Brain Hippocampus Middle brain
16 chr12:8997000-8998000 Enhancers Brain Substantia Nigra brain
17 chr12:8997000-8998000 Enhancers Right Ventricle heart
18 chr12:8997000-8998200 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr12:8997000-9001600 Strong transcription Esophagus oesophagus
20 chr12:8997200-8997600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
21 chr12:8997200-8997600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
22 chr12:8997200-8997600 Bivalent Enhancer Small Intestine intestine
23 chr12:8997200-8997600 Flanking Active TSS K562 blood
24 chr12:8997200-8997800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr12:8997200-8997800 Enhancers Cortex derived primary cultured neurospheres brain
26 chr12:8997200-8998000 Enhancers Adipose Nuclei Adipose
27 chr12:8997200-8998000 Enhancers Fetal Heart heart
28 chr12:8997200-8998000 Enhancers Pancreas Pancrea
29 chr12:8997400-8997600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr12:8997400-8997600 Enhancers Skeletal Muscle Female skeletal muscle
31 chr12:8997400-8997600 Flanking Active TSS Stomach Smooth Muscle stomach
32 chr12:8997400-8997600 Bivalent/Poised TSS A549 lung
33 chr12:8997400-8997600 Bivalent Enhancer HepG2 liver
34 chr12:8997400-8997600 Flanking Active TSS Osteobl bone
35 chr12:8997400-8997800 Enhancers Liver Liver
36 chr12:8997400-8998000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
37 chr12:8997400-8998000 Enhancers Left Ventricle heart
38 chr12:8997400-8998000 Enhancers Right Atrium heart
39 chr12:8997400-8998800 Enhancers Ovary ovary

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