Variant report
| Variant | rs5997818 |
|---|---|
| Chromosome Location | chr22:31346827-31346828 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr22:31317600-31364000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 2 | chr22:31319200-31347400 | Strong transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 3 | chr22:31319200-31350800 | Strong transcription | Brain Germinal Matrix | brain |
| 4 | chr22:31319200-31351800 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 5 | chr22:31319800-31353200 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 6 | chr22:31319800-31355800 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 7 | chr22:31320000-31354600 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 8 | chr22:31320000-31355600 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 9 | chr22:31320200-31353400 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 10 | chr22:31320200-31354800 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 11 | chr22:31320200-31355600 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 12 | chr22:31320200-31355800 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 13 | chr22:31320600-31347400 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 14 | chr22:31320600-31347800 | Strong transcription | Liver | Liver |
| 15 | chr22:31320600-31354400 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 16 | chr22:31320600-31354400 | Strong transcription | HepG2 | liver |
| 17 | chr22:31320800-31347000 | Strong transcription | NH-A | brain |
| 18 | chr22:31320800-31352600 | Strong transcription | Fetal Thymus | thymus |
| 19 | chr22:31321000-31352800 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 20 | chr22:31321000-31353400 | Strong transcription | Fetal Intestine Large | intestine |
| 21 | chr22:31321200-31350000 | Strong transcription | Fetal Lung | lung |
| 22 | chr22:31324800-31360400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 23 | chr22:31325600-31351600 | Strong transcription | Fetal Brain Female | brain |
| 24 | chr22:31326200-31347400 | Strong transcription | NHLF | lung |
| 25 | chr22:31326200-31349600 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 26 | chr22:31326200-31351800 | Strong transcription | Primary B cells from peripheral blood | blood |
| 27 | chr22:31326800-31347600 | Strong transcription | Fetal Kidney | kidney |
| 28 | chr22:31328200-31351000 | Strong transcription | ES-I3 Cell Line | embryonic stem cell |
| 29 | chr22:31332000-31347600 | Strong transcription | Fetal Brain Male | brain |
| 30 | chr22:31337200-31352800 | Strong transcription | Fetal Muscle Trunk | muscle |
| 31 | chr22:31337400-31347400 | Strong transcription | Lung | lung |
| 32 | chr22:31337800-31347600 | Strong transcription | Spleen | Spleen |
| 33 | chr22:31338400-31351600 | Weak transcription | Stomach Mucosa | stomach |
| 34 | chr22:31339200-31349200 | Strong transcription | K562 | blood |
| 35 | chr22:31339400-31347400 | Strong transcription | Thymus | Thymus |
| 36 | chr22:31339800-31347800 | Strong transcription | GM12878-XiMat | blood |
| 37 | chr22:31339800-31349400 | Strong transcription | Dnd41 | blood |
| 38 | chr22:31340000-31351000 | Strong transcription | Primary B cells from cord blood | blood |
| 39 | chr22:31340200-31347200 | Strong transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 40 | chr22:31340200-31347600 | Strong transcription | Pancreas | Pancrea |
| 41 | chr22:31340200-31352800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 42 | chr22:31340400-31347000 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 43 | chr22:31340400-31353400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 44 | chr22:31340600-31347400 | Genic enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 45 | chr22:31340800-31347400 | Strong transcription | HUVEC | blood vessel |
| 46 | chr22:31342400-31361000 | Weak transcription | Small Intestine | intestine |
| 47 | chr22:31342600-31351600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 48 | chr22:31343800-31353400 | Strong transcription | Fetal Muscle Leg | muscle |
| 49 | chr22:31343800-31356400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 50 | chr22:31344000-31348800 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
