Variant report

(count:25 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MTA3	chr22:31375855-31376606	GM12878	blood:	n/a	n/a
2	POLR2A	chr22:31375919-31376711	PFSK-1	brain:	n/a	n/a
3	POLR2A	chr22:31376560-31376973	Hela-S3	cervix:	n/a	n/a
4	YY1	chr22:31376300-31376609	SK-N-SH_RA	brain:	n/a	n/a
5	POLR2A	chr22:31375817-31377149	MCF-7	breast:	n/a	n/a
6	POLR2A	chr22:31375863-31376610	PANC-1	pancreas:	n/a	n/a
7	POLR2A	chr22:31375918-31376833	Hela-S3	cervix:	n/a	n/a
8	POLR2A	chr22:31375927-31376965	PFSK-1	brain:	n/a	n/a
9	SETDB1	chr22:31375502-31376713	U2OS	brain:	n/a	n/a
10	POLR2A	chr22:31375861-31376811	PBDE	blood:	n/a	n/a
11	POLR2A	chr22:31373217-31377074	MCF10A-Er-Src	breast:	n/a	n/a
12	POLR2A	chr22:31375990-31376611	U87	brain:	n/a	n/a
13	POLR2A	chr22:31375792-31376636	U87	brain:	n/a	n/a
14	POLR2A	chr22:31375791-31376800	SK-N-SH	brain:	n/a	n/a
15	POLR2A	chr22:31375722-31376743	H1-hESC	embryonic stem cell:	n/a	n/a
16	POLR2A	chr22:31375657-31376635	GM12878	blood:	n/a	n/a
17	POLR2A	chr22:31376488-31376584	K562	blood:	n/a	n/a
18	POLR2A	chr22:31375971-31376641	U87	brain:	n/a	n/a
19	POLR2A	chr22:31376417-31376706	HUVEC	blood vessel:	n/a	n/a
20	POLR2A	chr22:31375888-31376647	HepG2	liver:	n/a	n/a
21	POLR2A	chr22:31376245-31377039	SK-N-MC	brain:	n/a	n/a
22	POLR2A	chr22:31368958-31378923	MCF10A-Er-Src	breast:	n/a	n/a
23	POLR2A	chr22:31375979-31377161	HepG2	liver:	n/a	n/a
24	POLR2A	chr22:31369206-31376719	K562	blood:	n/a	n/a
25	POLR2A	chr22:31376441-31376641	HepG2	liver:	n/a	n/a

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr22:31375006..31378537-chr22:31476924..31478681,3	MCF-7	breast:
2	chr22:31376348..31379301-chr22:31392662..31394474,2	MCF-7	breast:
3	chr22:31371236..31374508-chr22:31375496..31377845,5	K562	blood:
4	chr22:31371775..31374026-chr22:31375760..31377892,3	K562	blood:
5	chr22:31375745..31378647-chr22:31380130..31383422,4	K562	blood:

No data

rSNPs within LD-proxies of this variant (count:27)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv9896	chr22:31369204-31513933	Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:31366400-31376800	ZNF genes & repeats	Brain Germinal Matrix	brain
2	chr22:31366800-31380800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr22:31373000-31381800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr22:31374200-31376800	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr22:31374400-31384000	Weak transcription	HSMMtube	muscle
6	chr22:31374600-31379200	Weak transcription	HSMM	muscle
7	chr22:31374800-31378000	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr22:31375000-31377200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr22:31375800-31376600	Enhancers	HepG2	liver
10	chr22:31376200-31376600	Enhancers	NHDF-Ad	bronchial
11	chr22:31376200-31376800	Enhancers	Skeletal Muscle Female	skeletal muscle

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