The 2.0 version of rSNPBase

Variant report

Variant rs12158547
Chromosome Location chr22:31298268-31298269
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:31265200-31299400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr22:31274200-31308400 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr22:31278400-31301600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr22:31278600-31321400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr22:31278800-31301600 Weak transcription A549 lung
6 chr22:31283000-31306600 Weak transcription Fetal Heart heart
7 chr22:31283400-31304000 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr22:31283600-31318400 Weak transcription Placenta Amnion Placenta Amnion
9 chr22:31284400-31308400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr22:31284800-31306600 Weak transcription Colonic Mucosa Colon
11 chr22:31286400-31299200 Weak transcription Liver Liver
12 chr22:31286400-31304000 Weak transcription Ovary ovary
13 chr22:31287200-31299200 Weak transcription Esophagus oesophagus
14 chr22:31287400-31300400 Weak transcription Muscle Satellite Cultured Cells --
15 chr22:31288400-31316400 Weak transcription Thymus Thymus
16 chr22:31289400-31298600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr22:31290000-31305200 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr22:31290000-31305200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr22:31290200-31298600 Weak transcription Duodenum Mucosa Duodenum
20 chr22:31290200-31299400 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr22:31290200-31303800 Weak transcription Gastric stomach
22 chr22:31290200-31305000 Weak transcription Pancreas Pancrea
23 chr22:31290200-31308400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr22:31290400-31316600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr22:31290600-31298400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr22:31290600-31299400 Weak transcription Right Ventricle heart
27 chr22:31290600-31316200 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr22:31290800-31320600 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr22:31291000-31316200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr22:31291200-31298400 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr22:31291200-31298400 Weak transcription Brain Angular Gyrus brain
32 chr22:31291200-31298600 Weak transcription Brain Cingulate Gyrus brain
33 chr22:31291200-31299200 Weak transcription Primary T cells from cord blood blood
34 chr22:31291200-31299200 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr22:31291200-31300000 Weak transcription NHDF-Ad bronchial
36 chr22:31291200-31302200 Weak transcription Brain Substantia Nigra brain
37 chr22:31291200-31302600 Weak transcription K562 blood
38 chr22:31291200-31316200 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr22:31291400-31298800 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr22:31291400-31301800 Weak transcription Placenta Placenta
41 chr22:31291400-31315400 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr22:31292400-31301400 Strong transcription Fetal Intestine Large intestine
43 chr22:31293800-31310200 Weak transcription Hela-S3 cervix
44 chr22:31294200-31302400 Strong transcription H1 Cell Line embryonic stem cell
45 chr22:31294400-31299000 Strong transcription HSMM muscle
46 chr22:31294800-31300800 Weak transcription Rectal Smooth Muscle rectum
47 chr22:31294800-31309400 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr22:31295400-31298600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr22:31295400-31298600 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr22:31295400-31298800 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015