Variant report
| Variant | rs5997825 |
|---|---|
| Chromosome Location | chr22:31359043-31359044 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr22:31317600-31364000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 2 | chr22:31324800-31360400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 3 | chr22:31342400-31361000 | Weak transcription | Small Intestine | intestine |
| 4 | chr22:31344600-31363600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 5 | chr22:31344800-31361600 | Weak transcription | Fetal Heart | heart |
| 6 | chr22:31345400-31364000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 7 | chr22:31345600-31364200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr22:31346000-31364400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 9 | chr22:31346200-31364200 | Weak transcription | Brain Substantia Nigra | brain |
| 10 | chr22:31347200-31363000 | Weak transcription | Colon Smooth Muscle | Colon |
| 11 | chr22:31347200-31364400 | Weak transcription | Esophagus | oesophagus |
| 12 | chr22:31347400-31359400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 13 | chr22:31347400-31362400 | Weak transcription | Gastric | stomach |
| 14 | chr22:31347400-31362400 | Weak transcription | Lung | lung |
| 15 | chr22:31347400-31363000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 16 | chr22:31347400-31363800 | Weak transcription | NHLF | lung |
| 17 | chr22:31347600-31359400 | Weak transcription | Pancreas | Pancrea |
| 18 | chr22:31347600-31363000 | Weak transcription | Spleen | Spleen |
| 19 | chr22:31347600-31363400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 20 | chr22:31347600-31363400 | Weak transcription | HMEC | breast |
| 21 | chr22:31347600-31364000 | Weak transcription | Fetal Kidney | kidney |
| 22 | chr22:31348600-31362800 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 23 | chr22:31348800-31363000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 24 | chr22:31348800-31363800 | Weak transcription | Brain Angular Gyrus | brain |
| 25 | chr22:31348800-31364000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 26 | chr22:31349000-31363000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 27 | chr22:31349000-31364400 | Weak transcription | Aorta | Aorta |
| 28 | chr22:31349200-31359600 | Weak transcription | K562 | blood |
| 29 | chr22:31349200-31360400 | Weak transcription | Hela-S3 | cervix |
| 30 | chr22:31349200-31363600 | Weak transcription | Brain Hippocampus Middle | brain |
| 31 | chr22:31349200-31364200 | Weak transcription | Thymus | Thymus |
| 32 | chr22:31349400-31359800 | Weak transcription | Dnd41 | blood |
| 33 | chr22:31349400-31364400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 34 | chr22:31349600-31359800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 35 | chr22:31349800-31360000 | Weak transcription | Right Ventricle | heart |
| 36 | chr22:31349800-31363800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 37 | chr22:31349800-31363800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 38 | chr22:31349800-31363800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 39 | chr22:31349800-31363800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 40 | chr22:31349800-31364200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 41 | chr22:31350400-31364200 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 42 | chr22:31350600-31363000 | Weak transcription | Psoas Muscle | Psoas |
| 43 | chr22:31350800-31363000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 44 | chr22:31350800-31363800 | Weak transcription | Brain Anterior Caudate | brain |
| 45 | chr22:31351000-31360400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 46 | chr22:31351000-31363600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 47 | chr22:31351000-31364400 | Weak transcription | Ovary | ovary |
| 48 | chr22:31351400-31362200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 49 | chr22:31351600-31359400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 50 | chr22:31351800-31363800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
