Variant report

Variant	rs60193905
Chromosome Location	chr7:65971260-65971261
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1)
CpG islands
(count:61)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	PAX5	chr7:65971148-65971426	GM12892	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:65971211-65971261	HRPEpiC	eye:	n/a
2	chr7:65971211-65971261	HCF	heart:	n/a
3	chr7:65971211-65971261	GM12878	blood:	n/a
4	chr7:65971211-65971261	AG09309	skin:	n/a
5	chr7:65971211-65971261	AG10803	skin:	n/a
6	chr7:65971211-65971261	IMR90	lung:	fetal
7	chr7:65971211-65971261	PFSK-1	brain:	n/a
8	chr7:65971211-65971261	GM12892	blood:	n/a
9	chr7:65971211-65971261	Hela-S3	cervix:	n/a
10	chr7:65971211-65971261	BE2_C	brain:	n/a
11	chr7:65971211-65971261	HPAEpiC	pulmonary alveolar:	n/a
12	chr7:65971211-65971261	K562	blood:	n/a
13	chr7:65971211-65971261	A549	lung:	n/a
14	chr7:65971211-65971261	HAEpiC	amniotic membrane:	n/a
15	chr7:65971211-65971261	HIPEpiC	eye:	n/a
16	chr7:65971211-65971261	PANC-1	pancreas:	n/a
17	chr7:65971211-65971261	NHDF-neo	bronchial:	n/a
18	chr7:65971211-65971261	MCF-7	breast:	n/a
19	chr7:65971211-65971261	Jurkat	blood:	n/a
20	chr7:65971211-65971261	HUVEC	blood vessel:	n/a
21	chr7:65971211-65971261	ovcar-3	ovarian:	n/a
22	chr7:65971211-65971261	ECC-1	luminal epithelium:	n/a
23	chr7:65971211-65971261	SAEC	small airway:	n/a
24	chr7:65971211-65971261	Caco-2	colon:	n/a
25	chr7:65971211-65971261	RPTEC	kidney:	n/a
26	chr7:65971211-65971261	Hepatocyte	liver:	n/a
27	chr7:65971211-65971261	SK-N-MC	brain:	n/a
28	chr7:65971211-65971261	HNPCEpiC	eye:	n/a
29	chr7:65971211-65971261	HEEpiC	esophagus:	n/a
30	chr7:65971211-65971261	HCT-116	colon:	n/a
31	chr7:65971211-65971261	AG04449	skin:	fetal
32	chr7:65971211-65971261	HCM	heart:	n/a
33	chr7:65971211-65971261	MCF10A-Er-Src	breast:	n/a
34	chr7:65971211-65971261	PrEC	prostate:	n/a
35	chr7:65971211-65971261	ProgFib	skin:	n/a
36	chr7:65971211-65971261	SK-N-SH_RA	brain:	n/a
37	chr7:65971211-65971261	NH-A	brain:	n/a
38	chr7:65971211-65971261	AoSMC	blood vessel:	n/a
39	chr7:65971211-65971261	HL-60	blood:	n/a
40	chr7:65971211-65971261	BJ	skin:	n/a
41	chr7:65971211-65971261	CMK	blood:	n/a
42	chr7:65971211-65971261	GM12891	blood:	n/a
43	chr7:65971211-65971261	GM19239	blood:	n/a
44	chr7:65971211-65971261	HepG2	liver:	n/a
45	chr7:65971211-65971261	HEK293	kidney:	embryo
46	chr7:65971211-65971261	NB4	blood:	n/a
47	chr7:65971211-65971261	HCPEpiC	choroid plexus:	n/a
48	chr7:65971211-65971261	U87	brain:	n/a
49	chr7:65971211-65971261	NHBE	bronchial:	n/a
50	chr7:65971211-65971261	LNCaP	prostate:	n/a

No data

Variant related genes	Relation type
ENSG00000179342	TF binding region
ENSG00000179342	CpG island

Extended variants
information (count: 113 )
Associated
traits (count: 18 )

rSNPs within LD-proxies of this variant (count:102)

rs_ID	r²[population]
rs1002053	0.81[EUR][1000 genomes]
rs10215948	0.80[EUR][1000 genomes]
rs10257427	0.80[EUR][1000 genomes]
rs10755833	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10950041	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11765965	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12532998	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12533997	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12535036	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12668936	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12673810	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12698520	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12698521	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12698523	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12698532	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13227219	0.82[ASN][1000 genomes]
rs13309022	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1363055	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1695815	0.81[EUR][1000 genomes]
rs1807064	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1833495	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1968225	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1974769	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1981798	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1981799	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2036264	0.81[EUR][1000 genomes]
rs2042133	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2077593	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2161065	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2277911	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2420591	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2420599	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34406470	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35149210	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35410151	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3735148	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3857684	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3935391	0.80[EUR][1000 genomes]
rs3981131	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4717292	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4717299	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4717300	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4718343	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4718344	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4718349	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4718357	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4718358	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs57739047	0.80[AMR][1000 genomes]
rs6460291	0.81[EUR][1000 genomes]
rs6460292	0.81[EUR][1000 genomes]
rs6460295	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6460296	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6460300	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6460304	0.80[AMR][1000 genomes]
rs6945019	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6945032	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6949920	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6956179	0.81[EUR][1000 genomes]
rs6957199	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6958200	0.82[EUR][1000 genomes]
rs6958271	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6958277	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6961155	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6961990	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6967996	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6970030	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6970357	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6970860	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6978429	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6978721	0.80[EUR][1000 genomes]
rs6979382	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs709595	0.81[EUR][1000 genomes]
rs709597	0.81[EUR][1000 genomes]
rs7781061	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7781698	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7783613	0.81[EUR][1000 genomes]
rs778685	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs778689	0.81[EUR][1000 genomes]
rs778692	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs778694	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs778695	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs778699	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs778700	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs778706	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs778708	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs778710	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs778712	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs778721	0.84[EUR][1000 genomes]
rs778723	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs778726	0.81[EUR][1000 genomes]
rs778735	0.81[EUR][1000 genomes]
rs7788984	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7789554	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7789768	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7792762	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7799834	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7803416	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7803424	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs937495	0.80[EUR][1000 genomes]
rs9691480	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9791895	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9969301	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532124	chr7:65371521-66234730	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	125 gene(s)	inside rSNPs	diseases
2	nsv1026559	chr7:65617368-66370805	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	116 gene(s)	inside rSNPs	diseases
3	nsv1035107	chr7:65814901-66114919	Genic enhancers Strong transcription ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
4	nsv538909	chr7:65814901-66114919	Strong transcription Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
5	nsv888326	chr7:65825257-66066999	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
6	nsv482441	chr7:65885824-66061788	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
7	nsv1027068	chr7:65901543-65991211	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
8	esv3447484	chr7:65909457-66033145	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
9	esv3377926	chr7:65934493-66051484	Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
10	nsv888327	chr7:65938980-66029429	Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
11	esv3423847	chr7:65941210-66054107	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases

mRNA abundance (count:18)

SNP	Gene	Cis/trans	Tissue	Source
rs60193905	RP4-756H11.3	cis	Muscle Skeletal	GTEx
rs60193905	RNU6-96P	cis	Thyroid	GTEx
rs60193905	RP4-756H11.3	cis	Skin Sun Exposed Lower leg	GTEx
rs60193905	GS1-124K5.4	cis	Artery Aorta	GTEx
rs60193905	RP4-756H11.3	cis	Esophagus Mucosa	GTEx
rs60193905	RP4-756H11.3	cis	Nerve Tibial	GTEx
rs60193905	RP4-756H11.3	cis	Esophagus Muscularis	GTEx
rs60193905	RP4-756H11.3	cis	Heart Left Ventricle	GTEx
rs60193905	GTF2IRD1P1	cis	Thyroid	GTEx
rs60193905	RP4-756H11.3	cis	Thyroid	GTEx
rs60193905	RP4-756H11.3	cis	Artery Aorta	GTEx
rs60193905	GS1-124K5.4	cis	Stomach	GTEx
rs60193905	RP4-756H11.3	cis	lung	GTEx
rs60193905	RP4-756H11.3	cis	Adipose Subcutaneous	GTEx
rs60193905	GS1-124K5.11	cis	Thyroid	GTEx
rs60193905	RP4-756H11.3	cis	Artery Tibial	GTEx
rs60193905	ASL	Cis_1M	lymphoblastoid	RTeQTL
rs60193905	GS1-124K5.4	cis	Whole Blood	GTEx

Chromatin state (count:67 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:65969000-65971800	Weak transcription	HepG2	liver
2	chr7:65970800-65971400	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr7:65970800-65971400	Bivalent/Poised TSS	Colonic Mucosa	Colon
4	chr7:65970800-65971400	Active TSS	Osteobl	bone
5	chr7:65970800-65971600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr7:65970800-65971800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
7	chr7:65970800-65972000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
8	chr7:65970800-65972600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
9	chr7:65970800-65972800	Enhancers	Primary T killer memory cells from peripheral blood	blood
10	chr7:65971000-65971400	Active TSS	Primary T helper naive cells fromperipheralblood	blood
11	chr7:65971000-65971400	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
12	chr7:65971000-65971400	Active TSS	Muscle Satellite Cultured Cells	--
13	chr7:65971000-65971400	Weak transcription	Liver	Liver
14	chr7:65971000-65971400	Bivalent/Poised TSS	Brain Germinal Matrix	brain
15	chr7:65971000-65971400	Bivalent/Poised TSS	Brain Dorsolateral Prefrontal Cortex	brain
16	chr7:65971000-65971400	Bivalent/Poised TSS	Colon Smooth Muscle	Colon
17	chr7:65971000-65971400	Active TSS	Right Atrium	heart
18	chr7:65971000-65971400	Active TSS	Right Ventricle	heart
19	chr7:65971000-65971400	Bivalent/Poised TSS	Skeletal Muscle Male	skeletal muscle
20	chr7:65971000-65971400	Active TSS	HUVEC	blood vessel
21	chr7:65971000-65971400	Active TSS	NHDF-Ad	bronchial
22	chr7:65971000-65971400	Bivalent/Poised TSS	NHEK	skin
23	chr7:65971000-65971400	Active TSS	NHLF	lung
24	chr7:65971000-65971600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr7:65971000-65971600	Bivalent/Poised TSS	Primary T cells from cord blood	blood
26	chr7:65971000-65971600	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
27	chr7:65971000-65971600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr7:65971000-65971600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr7:65971000-65971600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr7:65971000-65971600	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr7:65971000-65971600	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
32	chr7:65971000-65971600	Bivalent/Poised TSS	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr7:65971000-65971600	Active TSS	Brain Inferior Temporal Lobe	brain
34	chr7:65971000-65971600	Bivalent/Poised TSS	Duodenum Mucosa	Duodenum
35	chr7:65971000-65971600	Bivalent/Poised TSS	Fetal Adrenal Gland	Adrenal Gland
36	chr7:65971000-65971600	Bivalent/Poised TSS	Fetal Brain Female	brain
37	chr7:65971000-65971600	Bivalent/Poised TSS	Fetal Intestine Small	intestine
38	chr7:65971000-65971600	Bivalent/Poised TSS	Pancreatic Islets	Pancreatic Islet
39	chr7:65971000-65971600	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach
40	chr7:65971000-65971800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr7:65971000-65971800	Bivalent Enhancer	Rectal Mucosa Donor 29	rectum
42	chr7:65971000-65972000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
43	chr7:65971200-65971400	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
44	chr7:65971200-65971400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
45	chr7:65971200-65971400	Enhancers	Primary T helper naive cells from peripheral blood	blood
46	chr7:65971200-65971400	Active TSS	Primary T helper cells PMA-I stimulated	--
47	chr7:65971200-65971400	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr7:65971200-65971400	Bivalent/Poised TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr7:65971200-65971400	Active TSS	Cortex derived primary cultured neurospheres	brain
50	chr7:65971200-65971400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links