Variant report

Variant	rs10215948
Chromosome Location	chr7:65747786-65747787
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 185 )
Associated
traits (count: 26 )

rSNPs within LD-proxies of this variant (count:179)

rs_ID	r²[population]
rs1000464	0.89[CEU][hapmap];0.83[CHB][hapmap]
rs1002053	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10224872	0.88[CEU][hapmap];0.83[CHB][hapmap];0.81[AMR][1000 genomes]
rs10228885	0.89[CEU][hapmap]
rs10250544	0.81[GIH][hapmap]
rs10256544	0.89[CEU][hapmap];0.83[GIH][hapmap];0.84[MEX][hapmap];0.87[TSI][hapmap]
rs10257427	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10260426	0.89[CEU][hapmap];0.81[GIH][hapmap];0.87[TSI][hapmap]
rs10261398	0.89[CEU][hapmap];0.83[CHB][hapmap];0.83[MEX][hapmap];0.89[TSI][hapmap];0.83[AMR][1000 genomes]
rs10267430	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10276077	0.83[AMR][1000 genomes]
rs10282433	0.89[CEU][hapmap];0.83[CHB][hapmap];0.83[GIH][hapmap];0.84[MEX][hapmap];0.89[TSI][hapmap];0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs10447522	0.89[CEU][hapmap]
rs10755833	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10950033	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs10950041	0.80[EUR][1000 genomes]
rs1129531	0.83[GIH][hapmap];0.87[TSI][hapmap]
rs1167390	0.89[CEU][hapmap];0.83[GIH][hapmap];0.84[MEX][hapmap];0.87[TSI][hapmap]
rs1167406	0.89[CEU][hapmap]
rs11760844	0.89[CEU][hapmap];0.83[CHB][hapmap];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11765965	0.95[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11971949	0.81[EUR][1000 genomes]
rs11974219	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11974264	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11984115	0.89[CEU][hapmap];0.81[GIH][hapmap];0.87[TSI][hapmap]
rs12532998	0.81[EUR][1000 genomes]
rs12533997	0.81[EUR][1000 genomes]
rs12535036	0.81[EUR][1000 genomes]
rs12537823	0.89[CEU][hapmap];0.83[CHB][hapmap];0.83[MEX][hapmap];0.89[TSI][hapmap];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs12668936	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12673810	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12698520	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];0.95[MEX][hapmap];0.90[MKK][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12698521	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs12698523	0.81[EUR][1000 genomes]
rs13225383	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs13227219	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs13309022	0.81[EUR][1000 genomes]
rs1363055	0.83[EUR][1000 genomes]
rs1540651	0.81[EUR][1000 genomes]
rs1565531	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1643395	0.88[EUR][1000 genomes]
rs1695815	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1695820	0.92[CEU][hapmap];0.83[CHB][hapmap]
rs1807064	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1833495	0.83[EUR][1000 genomes]
rs1875057	0.88[CEU][hapmap];0.86[TSI][hapmap]
rs1968225	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1974769	0.82[EUR][1000 genomes]
rs1983372	0.92[CEU][hapmap];0.91[YRI][hapmap]
rs2036264	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];0.98[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2042133	0.82[EUR][1000 genomes]
rs2077593	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2087647	1.00[CEU][hapmap];0.95[YRI][hapmap]
rs2088653	0.89[CEU][hapmap];0.87[TSI][hapmap]
rs2088655	0.89[CEU][hapmap];0.87[TSI][hapmap]
rs2161065	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2173570	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2249458	0.85[CEU][hapmap]
rs2277911	0.82[EUR][1000 genomes]
rs2420168	0.81[EUR][1000 genomes]
rs2420591	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2420599	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs28682868	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2901152	0.89[CEU][hapmap];0.81[GIH][hapmap];0.87[TSI][hapmap]
rs34406470	0.81[EUR][1000 genomes]
rs35028832	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35149210	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs3735148	0.81[EUR][1000 genomes]
rs3857684	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs3935391	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3981131	0.81[EUR][1000 genomes]
rs4078376	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4149461	0.89[CEU][hapmap];0.83[CHB][hapmap];0.84[MEX][hapmap];0.89[TSI][hapmap];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4236208	0.89[CEU][hapmap];0.83[CHB][hapmap];0.89[TSI][hapmap];0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4587224	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4717292	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4717299	0.83[EUR][1000 genomes]
rs4717300	0.82[EUR][1000 genomes]
rs4718330	0.89[CEU][hapmap];0.83[GIH][hapmap];0.84[MEX][hapmap];0.87[TSI][hapmap]
rs4718343	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4718344	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4718349	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4718357	0.82[EUR][1000 genomes]
rs55748098	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55962648	0.81[EUR][1000 genomes]
rs60193905	0.80[EUR][1000 genomes]
rs6460282	0.89[CEU][hapmap];0.84[TSI][hapmap]
rs6460291	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6460292	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6460293	0.89[CEU][hapmap];0.87[TSI][hapmap]
rs6460295	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6460296	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6460300	0.83[EUR][1000 genomes]
rs6944374	0.85[CEU][hapmap];0.81[GIH][hapmap];0.86[TSI][hapmap]
rs6945019	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6945032	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6945843	0.81[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.96[MEX][hapmap];0.83[MKK][hapmap];0.98[TSI][hapmap];0.83[YRI][hapmap];0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6946143	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[LWK][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.95[YRI][hapmap]
rs6947339	0.89[CEU][hapmap];0.85[TSI][hapmap]
rs6949920	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6951503	0.85[CEU][hapmap]
rs6952182	0.89[CEU][hapmap];0.81[GIH][hapmap];0.87[TSI][hapmap]
rs6956179	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6957199	0.80[EUR][1000 genomes]
rs6958484	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[LWK][hapmap];0.86[MEX][hapmap];0.97[MKK][hapmap];0.95[TSI][hapmap];0.95[YRI][hapmap]
rs6959268	0.89[CEU][hapmap];0.83[CHB][hapmap];0.84[MEX][hapmap];0.89[TSI][hapmap]
rs6960446	0.89[CEU][hapmap];0.87[TSI][hapmap]
rs6960476	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6961155	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6961717	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[LWK][hapmap];0.92[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];0.95[YRI][hapmap]
rs6961990	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6962717	0.89[CEU][hapmap];0.90[CHB][hapmap]
rs6963646	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];0.95[YRI][hapmap];0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6964437	0.89[CEU][hapmap];0.81[GIH][hapmap];0.87[TSI][hapmap]
rs6970030	0.81[EUR][1000 genomes]
rs6970357	0.81[EUR][1000 genomes]
rs6970860	0.80[EUR][1000 genomes]
rs6971509	1.00[CEU][hapmap];0.93[GIH][hapmap];0.84[LWK][hapmap];0.96[MEX][hapmap];0.89[MKK][hapmap];0.95[TSI][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6971752	0.82[AMR][1000 genomes]
rs6974614	0.89[CEU][hapmap];0.82[GIH][hapmap];0.83[MEX][hapmap];0.87[TSI][hapmap]
rs6977501	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6978429	0.82[EUR][1000 genomes]
rs6978721	0.81[EUR][1000 genomes]
rs6979382	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs697970	1.00[CEU][hapmap]
rs709595	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs709596	0.81[AFR][1000 genomes]
rs709597	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs709609	0.89[CEU][hapmap];0.83[GIH][hapmap];0.87[TSI][hapmap]
rs7781061	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7781698	0.82[EUR][1000 genomes]
rs7782704	0.88[CEU][hapmap];0.83[CHB][hapmap]
rs7783613	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];0.98[TSI][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7783779	0.89[CEU][hapmap];0.87[TSI][hapmap]
rs778682	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs778685	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs778689	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs778692	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs778694	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs778695	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs778697	0.89[CEU][hapmap];0.84[TSI][hapmap]
rs778699	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs778700	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs778702	0.88[CEU][hapmap]
rs778706	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs778708	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs778709	0.86[EUR][1000 genomes]
rs778710	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs778711	0.89[CEU][hapmap]
rs778712	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs778720	0.87[CEU][hapmap];0.84[CHB][hapmap]
rs778721	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs778722	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap]
rs778723	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs778726	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs778727	0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs778731	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs778734	0.92[CEU][hapmap];0.83[CHB][hapmap]
rs778735	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs778736	0.89[CEU][hapmap];0.87[TSI][hapmap]
rs7788984	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7789554	0.82[EUR][1000 genomes]
rs7789768	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.96[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7791891	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7794930	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];0.98[TSI][hapmap];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7798630	0.89[CEU][hapmap]
rs7799834	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7801282	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[LWK][hapmap];0.92[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];0.95[YRI][hapmap]
rs7803416	0.82[EUR][1000 genomes]
rs7803424	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs875971	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[LWK][hapmap];0.92[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];0.95[YRI][hapmap];0.80[EUR][1000 genomes]
rs880166	0.89[CEU][hapmap]
rs908915	0.89[CEU][hapmap];0.89[GIH][hapmap];0.83[MEX][hapmap];0.89[TSI][hapmap]
rs937495	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];0.98[TSI][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs949930	0.89[CEU][hapmap];0.82[CHB][hapmap];0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9691480	0.83[EUR][1000 genomes]
rs9791895	0.82[EUR][1000 genomes]
rs9969301	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9986696	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532124	chr7:65371521-66234730	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	125 gene(s)	inside rSNPs	diseases
2	nsv1026559	chr7:65617368-66370805	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	116 gene(s)	inside rSNPs	diseases
3	nsv1028692	chr7:65673136-65751069	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv538908	chr7:65673136-65751069	Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv508458	chr7:65724222-65842639	Enhancers ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
6	nsv1034195	chr7:65743409-65828266	Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:26)

SNP	Gene	Cis/trans	Tissue	Source
rs10215948	RP4-756H11.3	cis	Muscle Skeletal	GTEx
rs10215948	ASL	Cis_1M	lymphoblastoid	RTeQTL
rs10215948	GS1-124K5.4	cis	Stomach	GTEx
rs10215948	RNU6-96P	cis	Thyroid	GTEx
rs10215948	GS1-124K5.11	cis	Thyroid	GTEx
rs10215948	KCTD7	cis	parietal	SCAN
rs10215948	GS1-124K5.4	cis	Artery Aorta	GTEx
rs10215948	GTF2IRD1P1	cis	Thyroid	GTEx
rs10215948	ASL	cis	cerebellum	SCAN
rs10215948	CRCP	cis	cerebellum	SCAN
rs10215948	RP4-756H11.3	cis	Artery Tibial	GTEx
rs10215948	TPST1	cis	lymphoblastoid	seeQTL
rs10215948	RP4-756H11.3	cis	Heart Left Ventricle	GTEx
rs10215948	GUSB	cis	cerebellum	SCAN
rs10215948	RP4-756H11.3	cis	Esophagus Mucosa	GTEx
rs10215948	RP4-756H11.3	cis	Artery Aorta	GTEx
rs10215948	RABGEF1	cis	cerebellum	SCAN
rs10215948	RP4-756H11.3	cis	Thyroid	GTEx
rs10215948	RP4-756H11.3	cis	Nerve Tibial	GTEx
rs10215948	GUSB	cis	parietal	SCAN
rs10215948	GS1-124K5.4	cis	Whole Blood	GTEx
rs10215948	RP4-756H11.3	cis	lung	GTEx
rs10215948	RP4-756H11.3	cis	Adipose Subcutaneous	GTEx
rs10215948	RP4-756H11.3	cis	Esophagus Muscularis	GTEx
rs10215948	RABGEF1	cis	parietal	SCAN
rs10215948	RP4-756H11.3	cis	Skin Sun Exposed Lower leg	GTEx

Chromatin state (count:56 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:65737800-65748600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr7:65740800-65751400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr7:65744800-65748400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr7:65745000-65748400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr7:65745200-65748400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr7:65745200-65751200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr7:65745600-65749200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr7:65745600-65749200	Enhancers	HMEC	breast
9	chr7:65746200-65747800	Enhancers	Ovary	ovary
10	chr7:65746400-65749200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr7:65746400-65749200	Enhancers	HSMMtube	muscle
12	chr7:65746600-65747800	Enhancers	Liver	Liver
13	chr7:65746600-65747800	Enhancers	Fetal Brain Male	brain
14	chr7:65746600-65748000	Enhancers	Brain Angular Gyrus	brain
15	chr7:65746600-65748200	Enhancers	Muscle Satellite Cultured Cells	--
16	chr7:65746600-65748400	Enhancers	Rectal Smooth Muscle	rectum
17	chr7:65746600-65748600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr7:65746600-65748800	Enhancers	Primary monocytes fromperipheralblood	blood
19	chr7:65746600-65749200	Enhancers	ES-I3 Cell Line	embryonic stem cell
20	chr7:65746600-65749200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr7:65746600-65749200	Enhancers	A549	lung
22	chr7:65746600-65749200	Enhancers	HSMM	muscle
23	chr7:65746600-65749200	Enhancers	HUVEC	blood vessel
24	chr7:65746600-65749200	Enhancers	NHLF	lung
25	chr7:65746800-65747800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr7:65746800-65747800	Enhancers	Breast Myoepithelial Primary Cells	Breast
27	chr7:65746800-65747800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr7:65746800-65747800	Enhancers	Brain Inferior Temporal Lobe	brain
29	chr7:65746800-65748000	Enhancers	Brain Cingulate Gyrus	brain
30	chr7:65746800-65748200	Enhancers	Aorta	Aorta
31	chr7:65746800-65748400	Enhancers	Stomach Smooth Muscle	stomach
32	chr7:65746800-65748600	Enhancers	Adipose Nuclei	Adipose
33	chr7:65746800-65748600	Enhancers	HepG2	liver
34	chr7:65746800-65749000	Enhancers	Hela-S3	cervix
35	chr7:65746800-65749200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
36	chr7:65747000-65747800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
37	chr7:65747000-65747800	Flanking Active TSS	Colon Smooth Muscle	Colon
38	chr7:65747000-65747800	Enhancers	Fetal Brain Female	brain
39	chr7:65747000-65747800	Weak transcription	Sigmoid Colon	Sigmoid Colon
40	chr7:65747000-65748000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr7:65747200-65747800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr7:65747200-65747800	Enhancers	K562	blood
43	chr7:65747200-65748000	Enhancers	Cortex derived primary cultured neurospheres	brain
44	chr7:65747200-65748400	Enhancers	NHDF-Ad	bronchial
45	chr7:65747200-65749000	Enhancers	Monocytes-CD14+_RO01746	blood
46	chr7:65747200-65749200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr7:65747200-65749200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
48	chr7:65747200-65749200	Enhancers	NH-A	brain
49	chr7:65747200-65749200	Enhancers	Osteobl	bone
50	chr7:65747200-65754000	Weak transcription	HUES64 Cell Line	embryonic stem cell

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