Variant report

Variant	rs4236208
Chromosome Location	chr7:65749078-65749079
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 177 )
Associated
traits (count: 28 )

rSNPs within LD-proxies of this variant (count:171)

rs_ID	r²[population]
rs1000464	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1002053	0.84[CEU][hapmap];0.83[CHB][hapmap]
rs10215948	0.89[CEU][hapmap];0.83[CHB][hapmap];0.89[TSI][hapmap];0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs10224872	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10228885	1.00[CEU][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10240249	0.81[EUR][1000 genomes]
rs10240949	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10250544	0.91[GIH][hapmap];0.89[LWK][hapmap];0.96[MKK][hapmap];0.84[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10255397	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10256544	1.00[ASW][hapmap];1.00[CEU][hapmap];0.96[GIH][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];0.89[MKK][hapmap];0.98[TSI][hapmap];0.94[YRI][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10257427	0.88[CEU][hapmap];0.83[CHB][hapmap];0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs10257911	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10260426	1.00[CEU][hapmap];0.93[GIH][hapmap];0.89[LWK][hapmap];0.87[MEX][hapmap];0.98[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10261398	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10263690	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10267430	0.88[CEU][hapmap];0.83[CHB][hapmap];0.82[AMR][1000 genomes]
rs10272149	0.84[EUR][1000 genomes]
rs10276077	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10282433	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap];0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10447522	1.00[CEU][hapmap];0.94[YRI][hapmap];0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10807703	0.83[ASN][1000 genomes]
rs10807704	0.85[EUR][1000 genomes]
rs1083554	0.87[EUR][1000 genomes]
rs10950033	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1129531	1.00[ASW][hapmap];0.96[GIH][hapmap];0.90[LWK][hapmap];0.84[MKK][hapmap];0.98[TSI][hapmap];0.94[YRI][hapmap];0.81[EUR][1000 genomes]
rs1167390	1.00[ASW][hapmap];1.00[CEU][hapmap];0.96[GIH][hapmap];0.93[LWK][hapmap];0.95[MEX][hapmap];0.86[MKK][hapmap];0.98[TSI][hapmap];0.94[YRI][hapmap]
rs1167406	1.00[CEU][hapmap];0.94[YRI][hapmap]
rs11760844	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11764589	0.86[EUR][1000 genomes]
rs11765965	0.82[CEU][hapmap]
rs11769079	0.86[YRI][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11984115	1.00[CEU][hapmap];0.93[GIH][hapmap];0.89[LWK][hapmap];0.87[MEX][hapmap];0.98[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12531677	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12534500	0.90[EUR][1000 genomes]
rs12537823	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap];0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12698520	0.88[CEU][hapmap];0.83[CHB][hapmap];0.82[MEX][hapmap]
rs13225672	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs13227219	0.85[CHB][hapmap]
rs13230545	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13245728	0.94[YRI][hapmap]
rs13309935	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1532571	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs160641	0.83[YRI][hapmap]
rs1616988	0.83[YRI][hapmap]
rs1643375	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1695820	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.84[EUR][1000 genomes]
rs1875057	1.00[CEU][hapmap];0.98[GIH][hapmap];0.89[LWK][hapmap];0.91[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1968225	0.89[CEU][hapmap];0.83[CHB][hapmap]
rs1976200	0.94[YRI][hapmap]
rs1983372	1.00[CEU][hapmap]
rs2036263	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2036264	0.89[CEU][hapmap];0.83[CHB][hapmap];0.89[GIH][hapmap];0.93[LWK][hapmap];0.91[TSI][hapmap];0.94[YRI][hapmap];0.88[AFR][1000 genomes]
rs2077593	0.89[CEU][hapmap];0.83[CHB][hapmap]
rs2087647	0.92[CEU][hapmap]
rs2088653	1.00[CEU][hapmap];0.98[GIH][hapmap];0.89[LWK][hapmap];0.87[MEX][hapmap];0.98[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2088655	1.00[CEU][hapmap];0.98[GIH][hapmap];0.89[LWK][hapmap];0.87[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];0.94[YRI][hapmap];0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2173570	0.89[CEU][hapmap];0.83[CHB][hapmap];0.94[YRI][hapmap];0.94[AFR][1000 genomes];0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2249458	0.96[CEU][hapmap];0.94[YRI][hapmap]
rs2420173	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2420174	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2420608	0.84[EUR][1000 genomes]
rs28391294	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs28491091	0.91[EUR][1000 genomes]
rs2901152	1.00[CEU][hapmap];0.93[GIH][hapmap];0.89[LWK][hapmap];0.87[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2901155	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2909688	0.91[EUR][1000 genomes]
rs313818	0.83[YRI][hapmap]
rs316305	0.83[YRI][hapmap]
rs316306	0.83[YRI][hapmap]
rs316323	0.83[YRI][hapmap]
rs316324	0.83[YRI][hapmap]
rs34913718	0.86[EUR][1000 genomes]
rs3893216	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3935391	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4078376	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4149461	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap];0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4587224	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4623294	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4718319	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4718324	0.87[EUR][1000 genomes]
rs4718328	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4718329	0.88[EUR][1000 genomes]
rs4718330	1.00[ASW][hapmap];1.00[CEU][hapmap];0.96[GIH][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];0.87[MKK][hapmap];0.98[TSI][hapmap];0.94[YRI][hapmap];0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs55748098	0.80[AMR][1000 genomes]
rs57739047	0.82[EUR][1000 genomes]
rs6460278	0.91[EUR][1000 genomes]
rs6460279	0.91[EUR][1000 genomes]
rs6460282	1.00[CEU][hapmap];0.82[GIH][hapmap];0.89[LWK][hapmap];0.82[MEX][hapmap];0.98[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6460284	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6460287	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6460290	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6460292	0.89[CEU][hapmap];0.83[CHB][hapmap];0.83[GIH][hapmap];0.89[TSI][hapmap]
rs6460293	1.00[CEU][hapmap];0.98[GIH][hapmap];0.85[LWK][hapmap];0.87[MEX][hapmap];0.98[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6460296	0.89[CEU][hapmap];0.83[CHB][hapmap]
rs6460301	0.81[EUR][1000 genomes]
rs6460302	0.83[EUR][1000 genomes]
rs6460304	0.82[EUR][1000 genomes]
rs6944374	0.96[CEU][hapmap];0.93[GIH][hapmap];0.85[LWK][hapmap];0.98[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6945019	0.89[CEU][hapmap];0.87[CHB][hapmap]
rs6945032	0.89[CEU][hapmap];0.83[CHB][hapmap]
rs6945843	0.92[CEU][hapmap];0.82[CHB][hapmap];0.81[GIH][hapmap];0.87[TSI][hapmap];0.80[AMR][1000 genomes]
rs6946143	0.89[CEU][hapmap];0.86[MEX][hapmap];0.86[TSI][hapmap]
rs6947339	1.00[CEU][hapmap];0.98[GIH][hapmap];0.86[LWK][hapmap];0.87[MEX][hapmap];0.98[MKK][hapmap];0.95[TSI][hapmap];0.94[YRI][hapmap]
rs6951503	0.96[CEU][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6952182	1.00[CEU][hapmap];0.93[GIH][hapmap];0.89[LWK][hapmap];0.87[MEX][hapmap];0.98[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6952473	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6956179	0.89[CEU][hapmap];0.83[CHB][hapmap];0.83[GIH][hapmap];0.89[TSI][hapmap]
rs6958294	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6958484	0.88[CEU][hapmap];0.81[MEX][hapmap];0.90[TSI][hapmap]
rs6959268	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap];0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6960446	1.00[CEU][hapmap];0.98[GIH][hapmap];0.89[LWK][hapmap];0.87[MEX][hapmap];0.94[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6961717	0.89[CEU][hapmap];0.87[MEX][hapmap];0.86[TSI][hapmap]
rs6962717	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6963228	0.84[EUR][1000 genomes]
rs6963646	0.89[CEU][hapmap];0.86[TSI][hapmap]
rs6964437	1.00[CEU][hapmap];0.93[GIH][hapmap];0.89[LWK][hapmap];0.87[MEX][hapmap];0.98[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6967708	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6971509	0.89[CEU][hapmap];0.85[GIH][hapmap];0.93[LWK][hapmap];0.83[MEX][hapmap];0.89[TSI][hapmap];0.94[YRI][hapmap];0.83[AFR][1000 genomes]
rs6971752	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6974614	1.00[ASW][hapmap];1.00[CEU][hapmap];0.93[GIH][hapmap];0.93[LWK][hapmap];0.95[MEX][hapmap];0.87[MKK][hapmap];0.98[TSI][hapmap];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6976714	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];0.89[YRI][hapmap];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6978028	0.85[EUR][1000 genomes]
rs6979452	0.84[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs697970	0.89[CEU][hapmap];0.94[YRI][hapmap]
rs6980451	0.82[EUR][1000 genomes]
rs709595	0.89[CEU][hapmap];0.83[CHB][hapmap]
rs709596	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs709609	0.92[ASW][hapmap];1.00[CEU][hapmap];0.96[GIH][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap]
rs71526537	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7778322	0.85[EUR][1000 genomes]
rs7781880	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7782704	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7782806	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7783613	0.89[CEU][hapmap];0.83[CHB][hapmap];0.89[GIH][hapmap];0.93[LWK][hapmap];0.91[TSI][hapmap];0.94[YRI][hapmap];0.88[AFR][1000 genomes]
rs7783779	1.00[CEU][hapmap];0.98[GIH][hapmap];0.89[LWK][hapmap];0.87[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs778680	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs778684	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs778686	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7786892	0.82[EUR][1000 genomes]
rs778690	0.85[EUR][1000 genomes]
rs778697	1.00[CEU][hapmap];0.98[GIH][hapmap];0.85[LWK][hapmap];0.87[MEX][hapmap];0.96[MKK][hapmap];0.95[TSI][hapmap];0.94[YRI][hapmap];0.85[EUR][1000 genomes]
rs778702	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs778703	0.87[EUR][1000 genomes]
rs778705	0.86[EUR][1000 genomes]
rs778706	0.89[CEU][hapmap]
rs778707	0.86[EUR][1000 genomes]
rs778711	1.00[CEU][hapmap];0.94[YRI][hapmap];0.86[EUR][1000 genomes]
rs778715	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs778716	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs778719	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs778720	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs778722	0.92[CEU][hapmap];0.83[CHB][hapmap]
rs778724	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs778728	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs778734	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs778735	0.81[AFR][1000 genomes]
rs778736	1.00[CEU][hapmap];0.98[GIH][hapmap];0.85[LWK][hapmap];0.87[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];0.94[YRI][hapmap];0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7787482	0.87[EUR][1000 genomes]
rs7789615	0.83[EUR][1000 genomes]
rs7789768	0.89[CEU][hapmap];0.83[CHB][hapmap];0.83[GIH][hapmap];0.83[MEX][hapmap];0.89[TSI][hapmap]
rs7794930	0.89[CEU][hapmap];0.83[CHB][hapmap];0.89[GIH][hapmap];0.93[LWK][hapmap];0.91[TSI][hapmap];0.94[YRI][hapmap];0.90[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs7796162	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7798630	1.00[CEU][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7801282	0.89[CEU][hapmap];0.87[MEX][hapmap];0.86[TSI][hapmap]
rs809025	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs875971	0.89[CEU][hapmap];0.87[MEX][hapmap];0.86[TSI][hapmap]
rs880166	1.00[CEU][hapmap];0.94[YRI][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs908915	1.00[ASW][hapmap];1.00[CEU][hapmap];0.89[GIH][hapmap];0.93[LWK][hapmap];0.95[MEX][hapmap];0.86[MKK][hapmap];0.95[TSI][hapmap];0.94[YRI][hapmap]
rs937495	0.89[CEU][hapmap];0.83[CHB][hapmap];0.89[GIH][hapmap];0.93[LWK][hapmap];0.91[TSI][hapmap];0.94[YRI][hapmap];0.90[AFR][1000 genomes];0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs949930	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9969301	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532124	chr7:65371521-66234730	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	125 gene(s)	inside rSNPs	diseases
2	nsv1026559	chr7:65617368-66370805	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	116 gene(s)	inside rSNPs	diseases
3	nsv1028692	chr7:65673136-65751069	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv538908	chr7:65673136-65751069	Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv508458	chr7:65724222-65842639	Enhancers ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
6	nsv1034195	chr7:65743409-65828266	Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:28)

SNP	Gene	Cis/trans	Tissue	Source
rs4236208	RP4-756H11.3	cis	Muscle Skeletal	GTEx
rs4236208	KCTD7	cis	parietal	SCAN
rs4236208	ASL	Cis_1M	lymphoblastoid	RTeQTL
rs4236208	GUSB	cis	parietal	SCAN
rs4236208	GS1-124K5.4	cis	Stomach	GTEx
rs4236208	RP4-756H11.3	cis	lung	GTEx
rs4236208	RP4-756H11.3	cis	Esophagus Mucosa	GTEx
rs4236208	RABGEF1	cis	cerebellum	SCAN
rs4236208	RP4-756H11.3	cis	Skin Sun Exposed Lower leg	GTEx
rs4236208	GS1-124K5.4	cis	Skin Sun Exposed Lower leg	GTEx
rs4236208	GUSB	cis	cerebellum	SCAN
rs4236208	GTF2IRD1P1	cis	Thyroid	GTEx
rs4236208	CRCP	cis	parietal	SCAN
rs4236208	RP4-756H11.3	cis	Heart Left Ventricle	GTEx
rs4236208	RP4-756H11.3	cis	Thyroid	GTEx
rs4236208	ZNF117	cis	parietal	SCAN
rs4236208	RP4-756H11.3	cis	Nerve Tibial	GTEx
rs4236208	RABGEF1	cis	parietal	SCAN
rs4236208	LINC00174	cis	Thyroid	GTEx
rs4236208	RP4-756H11.3	cis	Artery Tibial	GTEx
rs4236208	ASL	cis	cerebellum	SCAN
rs4236208	RP4-756H11.3	cis	Esophagus Muscularis	GTEx
rs4236208	RP4-756H11.3	cis	Adipose Subcutaneous	GTEx
rs4236208	TPST1	cis	lymphoblastoid	seeQTL
rs4236208	GS1-124K5.11	cis	Thyroid	GTEx
rs4236208	GS1-124K5.2	cis	Whole Blood	GTEx
rs4236208	RNU6-96P	cis	Thyroid	GTEx
rs4236208	CRCP	cis	cerebellum	SCAN

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:65740800-65751400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr7:65745200-65751200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr7:65745600-65749200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr7:65745600-65749200	Enhancers	HMEC	breast
5	chr7:65746400-65749200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr7:65746400-65749200	Enhancers	HSMMtube	muscle
7	chr7:65746600-65749200	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr7:65746600-65749200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr7:65746600-65749200	Enhancers	A549	lung
10	chr7:65746600-65749200	Enhancers	HSMM	muscle
11	chr7:65746600-65749200	Enhancers	HUVEC	blood vessel
12	chr7:65746600-65749200	Enhancers	NHLF	lung
13	chr7:65746800-65749200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr7:65747200-65749200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr7:65747200-65749200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr7:65747200-65749200	Enhancers	NH-A	brain
17	chr7:65747200-65749200	Enhancers	Osteobl	bone
18	chr7:65747200-65754000	Weak transcription	HUES64 Cell Line	embryonic stem cell
19	chr7:65747600-65749400	Enhancers	NHEK	skin
20	chr7:65747800-65766600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr7:65748000-65751400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr7:65748200-65749200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr7:65748200-65751200	Weak transcription	Aorta	Aorta
24	chr7:65748400-65762000	Weak transcription	Duodenum Smooth Muscle	Duodenum
25	chr7:65748600-65749200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr7:65748600-65750000	Weak transcription	HepG2	liver
27	chr7:65748800-65749200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
28	chr7:65748800-65749200	Enhancers	Stomach Mucosa	stomach
29	chr7:65749000-65749200	Enhancers	Brain Anterior Caudate	brain
30	chr7:65749000-65749200	Enhancers	Colon Smooth Muscle	Colon
31	chr7:65749000-65749400	Enhancers	Muscle Satellite Cultured Cells	--
32	chr7:65749000-65749400	Enhancers	NHDF-Ad	bronchial
33	chr7:65749000-65749600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr7:65749000-65750400	Weak transcription	Pancreatic Islets	Pancreatic Islet
35	chr7:65749000-65751400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr7:65749000-65751600	Weak transcription	Rectal Smooth Muscle	rectum
37	chr7:65749000-65761000	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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