Variant report

Variant rs60218085
Chromosome Location chr5:146889881-146889882
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:146886600-146890000 Active TSS Colon Smooth Muscle Colon
2 chr5:146886600-146890000 Active TSS Duodenum Smooth Muscle Duodenum
3 chr5:146886600-146890000 Active TSS Stomach Smooth Muscle stomach
4 chr5:146887200-146890000 Active TSS NHDF-Ad bronchial
5 chr5:146887200-146890200 Active TSS Ovary ovary
6 chr5:146887200-146890200 Active TSS Right Atrium heart
7 chr5:146887400-146890000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr5:146887400-146890000 Active TSS Aorta Aorta
9 chr5:146888000-146890000 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr5:146888000-146890000 Active TSS NHLF lung
11 chr5:146888000-146890200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr5:146888000-146890200 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
13 chr5:146888200-146890000 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
14 chr5:146888200-146890000 Active TSS Brain Substantia Nigra brain
15 chr5:146888200-146890000 Active TSS Left Ventricle heart
16 chr5:146888200-146890200 Bivalent/Poised TSS A549 lung
17 chr5:146888400-146890000 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr5:146888400-146890000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr5:146888400-146890000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr5:146888400-146890000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
21 chr5:146888400-146890000 Flanking Active TSS HMEC breast
22 chr5:146888400-146890200 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
23 chr5:146888600-146890000 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
24 chr5:146888600-146890200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
25 chr5:146888600-146890200 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr5:146888800-146890000 Flanking Active TSS Primary hematopoietic stem cells blood
27 chr5:146888800-146890000 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
28 chr5:146888800-146890000 Bivalent/Poised TSS Fetal Kidney kidney
29 chr5:146888800-146890200 Active TSS Fetal Brain Female brain
30 chr5:146889000-146890000 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr5:146889000-146890000 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
32 chr5:146889000-146890000 Active TSS Esophagus oesophagus
33 chr5:146889200-146890000 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
34 chr5:146889200-146890000 Flanking Active TSS Gastric stomach
35 chr5:146889200-146890200 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
36 chr5:146889400-146890000 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin03 Skin
37 chr5:146889400-146890000 Bivalent Enhancer Liver Liver
38 chr5:146889400-146890000 Bivalent/Poised TSS Psoas Muscle Psoas
39 chr5:146889400-146890000 Active TSS Spleen Spleen
40 chr5:146889600-146890000 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr5:146889600-146890000 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr5:146889600-146890000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
43 chr5:146889600-146890000 Flanking Bivalent TSS/Enh Fetal Heart heart
44 chr5:146889600-146890000 Flanking Active TSS Right Ventricle heart
45 chr5:146889600-146890000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
46 chr5:146889600-146890200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr5:146889600-146890200 Bivalent/Poised TSS Brain Cingulate Gyrus brain
48 chr5:146889600-146890200 Flanking Active TSS Fetal Brain Male brain
49 chr5:146889800-146890000 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
50 chr5:146889800-146890000 Flanking Bivalent TSS/Enh H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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