Variant report

Variant	rs60291058
Chromosome Location	chr3:60744791-60744792
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs17063617	1.00[EUR][1000 genomes]
rs17063923	1.00[EUR][1000 genomes]
rs7434129	0.88[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529602	chr3:60088353-60830769	Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv998815	chr3:60495872-60830769	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv999828	chr3:60537384-60785274	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:60739600-60746400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr3:60739800-60746800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr3:60741800-60746400	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr3:60742200-60748000	Enhancers	Primary neutrophils fromperipheralblood	blood
5	chr3:60742600-60745800	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr3:60743200-60745000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr3:60743200-60746400	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr3:60743400-60746400	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr3:60743800-60751600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr3:60744000-60746200	Enhancers	Primary hematopoietic stem cells short term culture	blood
11	chr3:60744400-60746400	Enhancers	Monocytes-CD14+_RO01746	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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