Variant report
| Variant | rs60341977 |
|---|---|
| Chromosome Location | chr12:42847933-42847934 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:42816200-42858200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 2 | chr12:42816800-42862400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 3 | chr12:42820000-42858200 | Weak transcription | Gastric | stomach |
| 4 | chr12:42820200-42853000 | Weak transcription | Fetal Heart | heart |
| 5 | chr12:42826400-42859000 | Weak transcription | Fetal Brain Male | brain |
| 6 | chr12:42826600-42858200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 7 | chr12:42831800-42876400 | Weak transcription | Psoas Muscle | Psoas |
| 8 | chr12:42834200-42859600 | Weak transcription | Brain Substantia Nigra | brain |
| 9 | chr12:42836000-42875800 | Weak transcription | Stomach Mucosa | stomach |
| 10 | chr12:42836600-42853000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 11 | chr12:42836800-42853000 | Weak transcription | Right Ventricle | heart |
| 12 | chr12:42836800-42858800 | Weak transcription | Brain Angular Gyrus | brain |
| 13 | chr12:42837000-42853200 | Weak transcription | NHEK | skin |
| 14 | chr12:42837000-42853800 | Weak transcription | Lung | lung |
| 15 | chr12:42837000-42858000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 16 | chr12:42837000-42858000 | Weak transcription | Aorta | Aorta |
| 17 | chr12:42837000-42858200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 18 | chr12:42837000-42868800 | Weak transcription | Esophagus | oesophagus |
| 19 | chr12:42837200-42863200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 20 | chr12:42837400-42848000 | Weak transcription | HepG2 | liver |
| 21 | chr12:42838400-42858000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 22 | chr12:42838600-42850000 | Weak transcription | HSMMtube | muscle |
| 23 | chr12:42838600-42853200 | Weak transcription | Brain Anterior Caudate | brain |
| 24 | chr12:42839800-42853000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 25 | chr12:42840000-42856400 | Weak transcription | Fetal Intestine Small | intestine |
| 26 | chr12:42840400-42850200 | Weak transcription | Left Ventricle | heart |
| 27 | chr12:42840400-42860800 | Weak transcription | Colonic Mucosa | Colon |
| 28 | chr12:42840600-42852800 | Weak transcription | Adipose Nuclei | Adipose |
| 29 | chr12:42840600-42858000 | Weak transcription | Placenta | Placenta |
| 30 | chr12:42840600-42860000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 31 | chr12:42840800-42849400 | Enhancers | Primary B cells from peripheral blood | blood |
| 32 | chr12:42840800-42853200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 33 | chr12:42840800-42853200 | Weak transcription | Fetal Kidney | kidney |
| 34 | chr12:42840800-42858200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 35 | chr12:42841000-42849000 | Enhancers | Primary B cells from cord blood | blood |
| 36 | chr12:42841000-42850200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 37 | chr12:42841000-42853000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 38 | chr12:42841000-42853000 | Weak transcription | Spleen | Spleen |
| 39 | chr12:42841000-42853600 | Weak transcription | Colon Smooth Muscle | Colon |
| 40 | chr12:42841000-42858600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 41 | chr12:42841200-42851800 | Weak transcription | HMEC | breast |
| 42 | chr12:42841400-42856400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 43 | chr12:42841400-42862000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 44 | chr12:42841600-42858400 | Weak transcription | Fetal Brain Female | brain |
| 45 | chr12:42841600-42862400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 46 | chr12:42842800-42850200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 47 | chr12:42842800-42850800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 48 | chr12:42843000-42850200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 49 | chr12:42843000-42851400 | Weak transcription | HSMM | muscle |
| 50 | chr12:42843000-42853000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
