Variant report
| Variant | rs58902406 |
|---|---|
| Chromosome Location | chr12:42748292-42748293 |
| allele | A/G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:42720800-42844400 | Weak transcription | Small Intestine | intestine |
| 2 | chr12:42721000-42758000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 3 | chr12:42721600-42748600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 4 | chr12:42721600-42750000 | Weak transcription | Aorta | Aorta |
| 5 | chr12:42721600-42750600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 6 | chr12:42721600-42751800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 7 | chr12:42721600-42769000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 8 | chr12:42721600-42778600 | Weak transcription | Spleen | Spleen |
| 9 | chr12:42721600-42800800 | Weak transcription | Psoas Muscle | Psoas |
| 10 | chr12:42721600-42803600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 11 | chr12:42721800-42750200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 12 | chr12:42721800-42756200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 13 | chr12:42721800-42769600 | Weak transcription | Brain Substantia Nigra | brain |
| 14 | chr12:42721800-42769800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 15 | chr12:42721800-42797000 | Weak transcription | NHLF | lung |
| 16 | chr12:42721800-42803600 | Weak transcription | Gastric | stomach |
| 17 | chr12:42722000-42769600 | Weak transcription | Brain Anterior Caudate | brain |
| 18 | chr12:42722000-42769600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 19 | chr12:42722000-42772600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 20 | chr12:42722000-42793200 | Weak transcription | Fetal Kidney | kidney |
| 21 | chr12:42722200-42749800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 22 | chr12:42722200-42750200 | Weak transcription | Colon Smooth Muscle | Colon |
| 23 | chr12:42722200-42752800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 24 | chr12:42722200-42769200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 25 | chr12:42724400-42755400 | Weak transcription | Pancreas | Pancrea |
| 26 | chr12:42726200-42749400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 27 | chr12:42730400-42750000 | Weak transcription | Ovary | ovary |
| 28 | chr12:42730600-42749800 | Weak transcription | Left Ventricle | heart |
| 29 | chr12:42730600-42750000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 30 | chr12:42730800-42748800 | Weak transcription | Adipose Nuclei | Adipose |
| 31 | chr12:42730800-42769600 | Weak transcription | NH-A | brain |
| 32 | chr12:42731000-42757400 | Weak transcription | Brain Germinal Matrix | brain |
| 33 | chr12:42731000-42768800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 34 | chr12:42731200-42754000 | Weak transcription | HUVEC | blood vessel |
| 35 | chr12:42731400-42769600 | Weak transcription | Fetal Lung | lung |
| 36 | chr12:42731800-42770400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 37 | chr12:42732000-42754200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 38 | chr12:42732000-42754200 | Weak transcription | Lung | lung |
| 39 | chr12:42732200-42749200 | Weak transcription | Fetal Muscle Leg | muscle |
| 40 | chr12:42732200-42749600 | Weak transcription | Placenta | Placenta |
| 41 | chr12:42732200-42781200 | Weak transcription | Fetal Brain Female | brain |
| 42 | chr12:42732200-42794400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 43 | chr12:42732400-42763600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 44 | chr12:42732400-42769600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 45 | chr12:42732600-42750000 | Weak transcription | Right Ventricle | heart |
| 46 | chr12:42733200-42749800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 47 | chr12:42733400-42748600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 48 | chr12:42733400-42796800 | Weak transcription | Brain Hippocampus Middle | brain |
| 49 | chr12:42733600-42748800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 50 | chr12:42734400-42749800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
