Variant report
| Variant | rs60396677 |
|---|---|
| Chromosome Location | chr12:50851821-50851822 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:50809600-50872200 | Weak transcription | Fetal Brain Male | brain |
| 2 | chr12:50810600-50856600 | Weak transcription | Aorta | Aorta |
| 3 | chr12:50819200-50870800 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 4 | chr12:50819800-50867400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 5 | chr12:50820000-50867200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 6 | chr12:50820200-50869800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 7 | chr12:50820200-50871000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 8 | chr12:50821600-50856800 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 9 | chr12:50821600-50863400 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 10 | chr12:50821600-50871400 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 11 | chr12:50821600-50872800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 12 | chr12:50825800-50873000 | Strong transcription | Liver | Liver |
| 13 | chr12:50827400-50870400 | Weak transcription | Stomach Mucosa | stomach |
| 14 | chr12:50828000-50867200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 15 | chr12:50828800-50857400 | Weak transcription | Gastric | stomach |
| 16 | chr12:50830000-50856800 | Weak transcription | Spleen | Spleen |
| 17 | chr12:50831000-50874000 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 18 | chr12:50833000-50856800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 19 | chr12:50833400-50872800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 20 | chr12:50834200-50856400 | Weak transcription | Colon Smooth Muscle | Colon |
| 21 | chr12:50834200-50872400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 22 | chr12:50834400-50852400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 23 | chr12:50835200-50853000 | Weak transcription | Right Ventricle | heart |
| 24 | chr12:50836000-50856600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 25 | chr12:50836000-50857800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 26 | chr12:50836400-50856600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 27 | chr12:50836400-50856800 | Weak transcription | Fetal Kidney | kidney |
| 28 | chr12:50836400-50866200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 29 | chr12:50836600-50870000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 30 | chr12:50836800-50867400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 31 | chr12:50837000-50854600 | Weak transcription | Brain Anterior Caudate | brain |
| 32 | chr12:50837200-50856800 | Weak transcription | Brain Angular Gyrus | brain |
| 33 | chr12:50837200-50862600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 34 | chr12:50839000-50852800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 35 | chr12:50839000-50869800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 36 | chr12:50839200-50854000 | Weak transcription | Fetal Lung | lung |
| 37 | chr12:50839200-50856400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 38 | chr12:50839200-50856800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 39 | chr12:50839200-50857000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 40 | chr12:50839200-50857400 | Weak transcription | Colonic Mucosa | Colon |
| 41 | chr12:50839400-50856600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 42 | chr12:50839600-50859200 | Weak transcription | HSMMtube | muscle |
| 43 | chr12:50839800-50854000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 44 | chr12:50840400-50857200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 45 | chr12:50840600-50852400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 46 | chr12:50840800-50856600 | Weak transcription | Brain Hippocampus Middle | brain |
| 47 | chr12:50840800-50858600 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 48 | chr12:50841000-50854800 | Weak transcription | Fetal Brain Female | brain |
| 49 | chr12:50841200-50860800 | Weak transcription | Brain Substantia Nigra | brain |
| 50 | chr12:50841800-50856400 | Weak transcription | Brain Germinal Matrix | brain |
