Variant report

Variant	rs60454817
Chromosome Location	chr14:65341796-65341797
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs230697	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs230717	0.83[AFR][1000 genomes]
rs2649194	0.83[AFR][1000 genomes]
rs375038	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs376295	0.83[AFR][1000 genomes]
rs56818480	1.00[AMR][1000 genomes]
rs61012404	0.88[AFR][1000 genomes]
rs66883381	0.80[AFR][1000 genomes]
rs7144515	0.80[AFR][1000 genomes]
rs7144637	0.88[AFR][1000 genomes]
rs73279812	0.88[AFR][1000 genomes]
rs73279816	0.87[AFR][1000 genomes]
rs73279823	0.88[AFR][1000 genomes]
rs73279833	0.88[AFR][1000 genomes]
rs73279834	0.88[AFR][1000 genomes]
rs73279839	0.88[AFR][1000 genomes]
rs73279848	0.87[AMR][1000 genomes]
rs8019346	0.88[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3693408	chr14:65292670-65358576	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
2	nsv516238	chr14:65327288-65358576	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65331800-65342400	Enhancers	Skeletal Muscle Male	skeletal muscle
2	chr14:65334200-65342000	Weak transcription	Right Atrium	heart
3	chr14:65335600-65344600	Weak transcription	Right Ventricle	heart
4	chr14:65339000-65342200	Enhancers	Psoas Muscle	Psoas
5	chr14:65339400-65342200	Weak transcription	Left Ventricle	heart
6	chr14:65339400-65344200	Enhancers	Skeletal Muscle Female	skeletal muscle
7	chr14:65340800-65342400	Enhancers	Fetal Heart	heart
8	chr14:65341000-65344200	Enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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