Variant report
| Variant | rs6049848 |
|---|---|
| Chromosome Location | chr20:24653383-24653384 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr20:24641200-24654000 | Weak transcription | Aorta | Aorta |
| 2 | chr20:24643400-24661400 | Weak transcription | Right Atrium | heart |
| 3 | chr20:24645800-24657200 | Weak transcription | Brain Anterior Caudate | brain |
| 4 | chr20:24646400-24657200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 5 | chr20:24646600-24657400 | Weak transcription | Brain Substantia Nigra | brain |
| 6 | chr20:24646800-24657200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 7 | chr20:24646800-24657400 | Weak transcription | Brain Angular Gyrus | brain |
| 8 | chr20:24647600-24653800 | Weak transcription | Brain Hippocampus Middle | brain |
| 9 | chr20:24649000-24657200 | Weak transcription | Gastric | stomach |
| 10 | chr20:24649400-24655600 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 11 | chr20:24650600-24655000 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 12 | chr20:24651600-24653800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 13 | chr20:24651800-24659000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 14 | chr20:24652200-24655000 | Enhancers | NHLF | lung |
| 15 | chr20:24652400-24654600 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 16 | chr20:24652400-24654800 | Enhancers | HSMM | muscle |
| 17 | chr20:24652600-24653800 | Enhancers | NH-A | brain |
| 18 | chr20:24652600-24654400 | Enhancers | HSMMtube | muscle |
| 19 | chr20:24652600-24654800 | Enhancers | NHDF-Ad | bronchial |
| 20 | chr20:24652800-24653800 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 21 | chr20:24652800-24654600 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 22 | chr20:24652800-24654800 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 23 | chr20:24652800-24655000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 24 | chr20:24653000-24654200 | Enhancers | A549 | lung |
| 25 | chr20:24653000-24654400 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 26 | chr20:24653000-24654400 | Enhancers | NHEK | skin |
| 27 | chr20:24653000-24654600 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 28 | chr20:24653000-24654800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 29 | chr20:24653000-24654800 | Enhancers | HMEC | breast |
| 30 | chr20:24653200-24653400 | Flanking Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 31 | chr20:24653200-24653400 | Flanking Active TSS | Osteobl | bone |
| 32 | chr20:24653200-24653600 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 33 | chr20:24653200-24653800 | Enhancers | Thymus | Thymus |
| 34 | chr20:24653200-24654000 | Enhancers | Fetal Thymus | thymus |
