Variant report

Variant	rs60535211
Chromosome Location	chr2:185786008-185786009
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11883625	1.00[EUR][1000 genomes]
rs11898003	1.00[EUR][1000 genomes]
rs11899942	1.00[EUR][1000 genomes]
rs4618009	1.00[EUR][1000 genomes]
rs56200326	1.00[EUR][1000 genomes]
rs57126669	1.00[EUR][1000 genomes]
rs59102345	1.00[EUR][1000 genomes]
rs59318193	1.00[EUR][1000 genomes]
rs73043271	1.00[EUR][1000 genomes]
rs73978079	1.00[EUR][1000 genomes]
rs73978095	1.00[EUR][1000 genomes]
rs73978098	1.00[EUR][1000 genomes]
rs73978101	1.00[EUR][1000 genomes]
rs73980304	1.00[EUR][1000 genomes]
rs73980313	1.00[EUR][1000 genomes]
rs73980315	1.00[EUR][1000 genomes]
rs73980325	1.00[EUR][1000 genomes]
rs73980326	1.00[EUR][1000 genomes]
rs73980329	1.00[EUR][1000 genomes]
rs7579459	1.00[EUR][1000 genomes]
rs7585984	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532412	chr2:185347334-186108701	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv520974	chr2:185742474-186148230	Strong transcription Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:185785800-185786200	Weak transcription	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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