Variant report

Variant	rs60544167
Chromosome Location	chr6:110368708-110368709
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs2126495	1.00[AMR][1000 genomes]
rs2126496	1.00[AMR][1000 genomes]
rs2126497	1.00[AMR][1000 genomes]
rs2169525	1.00[AMR][1000 genomes]
rs2169526	1.00[AMR][1000 genomes]
rs2361493	1.00[AMR][1000 genomes]
rs55864076	1.00[AMR][1000 genomes]
rs56125429	1.00[AMR][1000 genomes]
rs56818924	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57366952	1.00[AMR][1000 genomes]
rs57742381	1.00[AMR][1000 genomes]
rs58305239	1.00[AMR][1000 genomes]
rs58626152	1.00[AMR][1000 genomes]
rs58965262	1.00[AMR][1000 genomes]
rs60431992	1.00[AMR][1000 genomes]
rs61133699	1.00[AMR][1000 genomes]
rs61476729	1.00[AMR][1000 genomes]
rs61514346	1.00[AMR][1000 genomes]
rs6907257	1.00[AMR][1000 genomes]
rs6913197	1.00[AMR][1000 genomes]
rs6922544	1.00[AMR][1000 genomes]
rs6928253	1.00[AMR][1000 genomes]
rs6928417	1.00[AMR][1000 genomes]
rs6928628	1.00[AMR][1000 genomes]
rs6928636	1.00[AMR][1000 genomes]
rs73762987	1.00[AMR][1000 genomes]
rs73762989	1.00[AMR][1000 genomes]
rs73762993	1.00[AMR][1000 genomes]
rs73762994	1.00[AMR][1000 genomes]
rs73762995	1.00[AMR][1000 genomes]
rs73762998	1.00[AMR][1000 genomes]
rs73762999	1.00[AMR][1000 genomes]
rs73763000	1.00[AMR][1000 genomes]
rs73763002	1.00[AMR][1000 genomes]
rs73765604	1.00[AMR][1000 genomes]
rs73765606	1.00[AMR][1000 genomes]
rs73765608	1.00[AMR][1000 genomes]
rs73765609	1.00[AMR][1000 genomes]
rs73765610	1.00[AMR][1000 genomes]
rs73765611	1.00[AMR][1000 genomes]
rs73765612	1.00[AMR][1000 genomes]
rs73765613	1.00[AMR][1000 genomes]
rs73765614	1.00[AMR][1000 genomes]
rs73765615	1.00[AMR][1000 genomes]
rs7742693	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017642	chr6:110252276-110386453	Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv538417	chr6:110252276-110386453	Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:110366000-110370800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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