The 2.0 version of rSNPBase

Variant report

Variant rs60587131
Chromosome Location chr1:173460154-173460155
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173448000-173477000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:173450000-173461800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr1:173450400-173460800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr1:173451000-173461800 Strong transcription Skeletal Muscle Female skeletal muscle
5 chr1:173451000-173462200 Strong transcription Liver Liver
6 chr1:173456000-173460600 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:173456800-173464600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr1:173457000-173460200 Weak transcription Small Intestine intestine
9 chr1:173457200-173466200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:173457200-173466800 Weak transcription Gastric stomach
11 chr1:173457400-173460200 Weak transcription GM12878-XiMat blood
12 chr1:173457400-173460400 Weak transcription NHEK skin
13 chr1:173457400-173463800 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr1:173457600-173462200 Weak transcription Fetal Brain Female brain
15 chr1:173457600-173464400 Weak transcription HepG2 liver
16 chr1:173457600-173466000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr1:173457800-173462000 Weak transcription NHDF-Ad bronchial
18 chr1:173457800-173465000 Weak transcription Spleen Spleen
19 chr1:173458000-173460200 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr1:173458000-173460200 Weak transcription Colonic Mucosa Colon
21 chr1:173458200-173462200 Weak transcription Primary B cells from cord blood blood
22 chr1:173458400-173460200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr1:173458400-173460800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:173458400-173461400 Weak transcription NHLF lung
25 chr1:173458400-173464400 Weak transcription Hela-S3 cervix
26 chr1:173458600-173460200 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr1:173458600-173460200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr1:173458600-173460200 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr1:173458600-173460200 Weak transcription Brain Substantia Nigra brain
30 chr1:173458600-173460200 Weak transcription Duodenum Mucosa Duodenum
31 chr1:173458600-173460200 Weak transcription Fetal Lung lung
32 chr1:173458600-173460200 Weak transcription Pancreas Pancrea
33 chr1:173458600-173460200 Weak transcription HUVEC blood vessel
34 chr1:173458600-173460400 Weak transcription Rectal Smooth Muscle rectum
35 chr1:173458600-173460600 Weak transcription Osteobl bone
36 chr1:173458600-173460800 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr1:173458600-173461000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr1:173458600-173461000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:173458600-173461000 Weak transcription HMEC breast
40 chr1:173458600-173461200 Weak transcription Fetal Brain Male brain
41 chr1:173458600-173461400 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr1:173458600-173461400 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr1:173458600-173461600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr1:173458600-173461800 Weak transcription Colon Smooth Muscle Colon
45 chr1:173458600-173462200 Weak transcription H9 Cell Line embryonic stem cell
46 chr1:173458600-173462200 Weak transcription Thymus Thymus
47 chr1:173458600-173462400 Weak transcription NH-A brain
48 chr1:173458600-173462600 Weak transcription Primary hematopoietic stem cells blood
49 chr1:173458600-173463000 Weak transcription Psoas Muscle Psoas
50 chr1:173458600-173467200 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015