The 2.0 version of rSNPBase

Variant report

Variant rs61261546
Chromosome Location chr1:173442493-173442494
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173430400-173442800 Weak transcription Pancreas Pancrea
2 chr1:173430400-173444400 Weak transcription Right Ventricle heart
3 chr1:173430600-173442600 Weak transcription Aorta Aorta
4 chr1:173430600-173443200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:173430600-173444400 Weak transcription Rectal Smooth Muscle rectum
6 chr1:173430800-173445000 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr1:173431000-173442600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr1:173431000-173442600 Weak transcription Brain Inferior Temporal Lobe brain
9 chr1:173431000-173444400 Weak transcription Left Ventricle heart
10 chr1:173431200-173442800 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr1:173432800-173442600 Weak transcription Fetal Heart heart
12 chr1:173433200-173444200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr1:173433400-173442800 Weak transcription Primary T cells fromperipheralblood blood
14 chr1:173435600-173442800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr1:173436400-173442800 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr1:173438000-173442600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
17 chr1:173438200-173445000 Weak transcription Primary B cells from cord blood blood
18 chr1:173439000-173442800 Weak transcription Primary neutrophils fromperipheralblood blood
19 chr1:173439200-173442800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
20 chr1:173440000-173443200 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr1:173440000-173444400 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr1:173440200-173442600 Weak transcription Brain Hippocampus Middle brain
23 chr1:173440200-173442800 Strong transcription Primary T cells from cord blood blood
24 chr1:173440200-173443000 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr1:173440200-173443600 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr1:173440200-173444000 Weak transcription Fetal Muscle Leg muscle
27 chr1:173440400-173442600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr1:173440400-173442800 Weak transcription Fetal Lung lung
29 chr1:173440400-173442800 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr1:173440400-173443000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
31 chr1:173440400-173443000 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr1:173440400-173444400 Weak transcription Fetal Stomach stomach
33 chr1:173440400-173444800 Weak transcription Primary B cells from peripheral blood blood
34 chr1:173440400-173444800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr1:173440400-173445200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr1:173440600-173442600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
37 chr1:173440600-173445200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:173440600-173445200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr1:173440600-173445800 Weak transcription Spleen Spleen
40 chr1:173441000-173444400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr1:173441000-173445000 Weak transcription H9 Cell Line embryonic stem cell
42 chr1:173441200-173445000 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr1:173441200-173445000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr1:173441400-173442800 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr1:173441400-173443200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:173441400-173443800 Weak transcription Fetal Muscle Trunk muscle
47 chr1:173441400-173444400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr1:173441400-173444400 Weak transcription Dnd41 blood
49 chr1:173441400-173445200 Weak transcription Primary hematopoietic stem cells blood
50 chr1:173441600-173442600 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015