The 2.0 version of rSNPBase

Variant report

Variant rs60594364
Chromosome Location chr1:179931948-179931949
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179924800-179935600 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:179924800-179937800 Weak transcription Spleen Spleen
3 chr1:179924800-179938000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:179924800-179938000 Weak transcription Lung lung
5 chr1:179924800-179963600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr1:179925200-179946200 Weak transcription Stomach Mucosa stomach
7 chr1:179925400-179946000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr1:179925600-179935600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:179925600-179938400 Weak transcription HSMM muscle
10 chr1:179925800-179933400 Weak transcription Brain Cingulate Gyrus brain
11 chr1:179925800-179935600 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr1:179925800-179935600 Weak transcription Stomach Smooth Muscle stomach
13 chr1:179925800-179937600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:179925800-179937600 Weak transcription Brain Hippocampus Middle brain
15 chr1:179925800-179937600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:179925800-179937800 Weak transcription Thymus Thymus
17 chr1:179925800-179940600 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr1:179926000-179937800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr1:179926000-179938000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr1:179926000-179938000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr1:179926000-179938000 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr1:179926000-179938000 Weak transcription Right Atrium heart
23 chr1:179926000-179938200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr1:179926000-179938400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:179926400-179937800 Weak transcription Brain Angular Gyrus brain
26 chr1:179926600-179933800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:179926800-179934000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:179926800-179934200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:179926800-179934400 Weak transcription Duodenum Mucosa Duodenum
30 chr1:179926800-179935000 Weak transcription Primary B cells from cord blood blood
31 chr1:179926800-179961400 Weak transcription A549 lung
32 chr1:179927000-179933400 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:179927000-179933600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:179927000-179934000 Weak transcription Osteobl bone
35 chr1:179927000-179935600 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr1:179927000-179935600 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr1:179927000-179935600 Weak transcription K562 blood
38 chr1:179927000-179937800 Weak transcription Primary monocytes fromperipheralblood blood
39 chr1:179927000-179965600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr1:179927200-179933800 Weak transcription Brain Anterior Caudate brain
41 chr1:179927200-179935400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr1:179927200-179937600 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr1:179927200-179940600 Weak transcription NHDF-Ad bronchial
44 chr1:179927800-179932000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr1:179927800-179932000 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr1:179927800-179932800 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr1:179927800-179933600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr1:179927800-179934000 Weak transcription Adipose Nuclei Adipose
49 chr1:179928000-179932800 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr1:179928000-179935800 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015